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Nucleic atom dist Protein atom
DG21:U.O5'/1 2.62 TYR42:P.OH/1
DT31:U.OP1/1 3.29 ARG17:S.N/1
DT31:U.OP2/1 3.12 ARG17:S.NE/1
DT32:U.OP1/1 2.95 LYS15:S.O/1
DG37:U.N2/1 2.98 ARG42:S.NH2/1
DA39:U.O3'/1 2.92 THR88:P.OG1/1
DG40:U.OP1/1 3.17 SER87:P.N/1
DC51:U.OP1/1 2.77 ARG72:Q.NH1/1
DC51:U.OP1/1 2.82 PHE84:Q.N/1
DC51:U.OP2/1 2.7 ARG72:Q.NH2/1
DG55:U.OP1/1 3 SER866:Y.OG/1
DC56:U.OP1/1 3.36 ARG846:Y.NH1/1
DC56:U.OP2/1 2.71 SER840:Y.N/1
DC56:U.OP2/1 2.94 ARG846:Y.NH2/1
DT58:U.OP1/1 3.29 LYS581:Y.NZ/1
DA61:U.OP1/1 3.16 ARG36:R.NH1/1
DA61:U.OP2/1 2.59 ARG36:R.NH1/1
DG71:U.OP1/1 3.24 VAL117:Q.N/1
DG71:U.OP1/1 2.35 THR118:Q.OG1/1
DC82:U.OP1/1 3.04 ILE46:B.N/1
DC82:U.OP2/1 3.07 ARG35:B.NH2/1
DG83:U.N3/1 3.2 ARG40:N.NH1/1
DC92:U.OP2/1 3.29 LEU65:N.N/1
DG99:U.N2/1 3.42 ARG83:N.NH2/1
DG102:U.OP1/1 2.43 THR80:B.OG1/1
DG102:U.OP2/1 3.3 LYS79:B.N/1
DA113:U.OP1/1 2.78 VAL43:O.O/1
DG122:U.O5'/1 2.45 TYR40:T.OH/1
DG122:U.N2/1 3.01 ARG33:T.NH1/1
DG122:U.N2/1 3.02 ARG33:T.NH2/1
DC123:U.OP1/1 2.63 TYR40:T.OH/1
DA124:U.OP1/1 3.11 LYS34:T.N/1
DA124:U.OP1/1 2.9 LYS34:T.O/1
DA131:U.O3'/1 3.15 ARG77:O.NH1/1
DG132:U.OP1/1 2.9 THR76:O.OG1/1
DC36:W.OP1/1 3.17 LYS583:Y.NZ/1
DA41:W.OP2/1 2.95 TYR42:T.OH/1
DG45:W.N2/1 3.02 ARG33:T.NH2/1
DC46:W.O2/1 2.99 ARG33:T.NH2/1
DA51:W.OP1/1 3.3 ARG17:O.N/1
DA51:W.OP1/1 3.35 GLY28:O.N/1
DA51:W.OP2/1 2.63 ARG17:O.NE/1
DA51:W.N3/1 3.45 ALA12:O.N/1
DG52:W.OP1/1 2.88 LYS15:O.O/1
DG52:W.O4'/1 2.99 ALA12:O.N/1
DG57:W.N2/1 3.13 ARG42:O.NH2/1
DG58:W.N2/1 2.99 ARG42:O.NH2/1
DA60:W.OP1/1 3.19 SER87:T.N/1
DA60:W.OP1/1 2.98 SER87:T.OG/1
DA60:W.OP1/1 2.71 THR88:T.OG1/1
DT70:W.O2/1 3.17 ARG83:N.NH1/1
DT71:W.OP1/1 3.15 ARG72:N.NH1/1
DT71:W.OP1/1 3.12 ARG72:N.NH2/1
DT71:W.OP1/1 2.57 PHE84:N.N/1
DT71:W.OP2/1 2.91 PHE84:N.O/1
DA81:W.OP1/1 2.87 ARG36:B.NH1/1
DA81:W.OP1/1 3 ARG36:B.NH2/1
DA81:W.OP2/1 2.73 ARG36:B.NH1/1
DG86:W.N2/1 3.15 ARG40:N.NH2/1
DG86:W.N3/1 3.43 ARG40:N.NH2/1
DG89:W.OP1/1 2.61 ARG42:N.NH1/1
DG89:W.O5'/1 2.99 ARG42:N.NH2/1
DA91:W.OP1/1 3.24 VAL117:N.N/1
DA91:W.OP1/1 2.99 THR118:N.N/1
DA91:W.OP1/1 2.52 THR118:N.OG1/1
DC101:W.OP1/1 2.84 SER47:R.OG/1
DC101:W.OP2/1 3.27 GLY48:R.N/1
DG102:W.OP1/1 2.99 ARG39:R.NH1/1
DG102:W.OP1/1 3.04 ARG39:R.NH2/1
DG102:W.OP1/1 2.83 ILE46:R.N/1
DG102:W.N2/1 3.42 ARG40:Q.NE/1
DG102:W.N2/1 2.99 ARG40:Q.NH2/1
DT103:W.OP1/1 2.91 ARG42:Q.O/1
DT103:W.OP1/1 2.84 GLY44:Q.N/1
DT103:W.O4'/1 2.83 ARG40:Q.NH2/1
DT103:W.O2/1 2.27 ARG40:Q.NH2/1
DG112:W.OP1/1 2.84 ARG63:Q.NH1/1
DG114:W.N2/1 3.01 ARG868:Y.NH1/1
DG115:W.N3/1 2.88 ARG868:Y.NH1/1
DG117:W.OP1/1 2.98 GLN631:Y.NE2/1
DA122:W.OP1/1 2.94 LYS79:R.N/1
DA122:W.OP1/1 2.96 THR80:R.OG1/1
DA133:W.OP1/1 2.95 VAL43:S.O/1
DT138:W.O2/1 3.13 ALA12:S.O/1
DG142:W.O5'/1 2.77 TYR40:P.OH/1
DG151:W.N3/1 3.53 ARG77:S.NH1/1
DC152:W.OP1/1 2.77 THR76:S.N/1
DC152:W.OP1/1 2.76 THR76:S.OG1/1
DC152:W.OP1/1 2.54 ARG77:S.N/1
DC164:W.OP1/1 3.24 ARG42:N.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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