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Nucleic atom dist Protein atom
DA-224:I.OP1/1 3.48 SER53:N.N/1
DA-224:I.OP2/1 2.74 SER53:N.OG/1
DG-223:I.OP2/1 3.43 ILE51:N.N/1
DG-223:I.OP2/1 2.91 ILE51:N.O/1
DG-222:I.OP2/1 2.61 TYR39:N.OH/1
DA-214:I.OP1/1 3.08 ARG32:M.NH1/1
DT-213:I.OP2/1 2.86 ARG17:M.NE/1
DT-213:I.OP2/1 2.82 ARG17:M.NH2/1
DT-212:I.OP1/1 2.64 ARG20:M.NH2/1
DG-204:I.OP1/1 2.72 SER84:N.N/1
DG-204:I.OP1/1 2.91 THR85:N.N/1
DG-204:I.OP1/1 2.86 THR85:N.OG1/1
DA-203:I.OP1/1 2.89 ARG83:N.NH2/1
DG-194:I.N3/1 3.18 ARG83:K.NH2/1
DC-193:I.OP1/1 2.52 ARG72:K.NH1/1
DC-193:I.OP1/1 2.88 PHE84:K.N/1
DC-193:I.OP2/1 2.6 ARG72:K.NH2/1
DA-183:I.OP1/1 3 ARG36:L.NH1/1
DA-183:I.OP1/1 2.89 ARG36:L.NH2/1
DA-183:I.OP2/1 2.94 ARG36:L.NH1/1
DA-175:I.OP1/1 2.76 ARG42:K.NE/1
DG-173:I.OP1/1 2.78 VAL117:K.N/1
DG-173:I.OP1/1 2.77 THR118:K.N/1
DG-173:I.OP1/1 2.83 THR118:K.OG1/1
DC-162:I.OP1/1 2.95 ILE46:P.N/1
DG-161:I.OP1/1 2.98 GLY44:O.N/1
DG-161:I.OP1/1 3.1 VAL46:O.N/1
DG-161:I.OP1/1 3.21 ALA47:O.N/1
DC-160:I.OP1/1 3.44 TYR41:O.N/1
DA-153:I.OP1/1 3.02 ARG69:O.NH2/1
DA-153:I.OP2/1 3.16 ARG69:O.NH2/1
DC-152:I.OP1/1 3 LYS64:O.N/1
DC-152:I.OP2/1 3.11 LEU65:O.N/1
DG-142:I.OP1/1 2.78 LYS79:P.N/1
DT-132:I.OP1/1 3.31 ALA45:Q.N/1
DA-131:I.OP1/1 2.44 VAL43:Q.N/1
DA-131:I.OP1/1 3.17 VAL43:Q.O/1
DG-122:I.OP1/1 2.94 TYR37:R.OH/1
DG-122:I.N2/1 3.06 ARG30:R.NH1/1
DG-122:I.N2/1 3.43 ARG30:R.NH2/1
DC-121:I.OP1/1 3.27 ARG29:Q.NH2/1
DC-121:I.OP1/1 3.18 SER33:R.N/1
DC-121:I.O3'/1 3.36 LYS31:R.N/1
DA-120:I.OP1/1 2.96 LYS31:R.N/1
DA-113:I.O4'/1 2.91 ARG77:Q.NH2/1
DG-112:I.OP1/1 2.77 THR76:Q.N/1
DG-112:I.OP1/1 2.76 ARG77:Q.N/1
DG-112:I.OP2/1 3.21 THR76:Q.N/1
DG-112:I.O5'/1 3.07 LYS75:Q.NZ/1
DA-66:I.OP1/1 2.95 ARG49:E.NH2/1
DA-54:I.OP1/1 2.9 SER53:D.N/1
DA-54:I.OP2/1 2.62 SER53:D.OG/1
DG-53:I.OP2/1 3.43 ILE51:D.N/1
DG-53:I.OP2/1 2.95 ILE51:D.O/1
DG-52:I.OP2/1 2.58 TYR39:D.OH/1
DA-44:I.OP1/1 3.05 ARG32:C.NH1/1
DT-43:I.OP2/1 2.9 ARG17:C.NE/1
DT-43:I.OP2/1 2.71 ARG17:C.NH2/1
DT-42:I.OP1/1 2.49 ARG20:C.NH2/1
DG-34:I.OP1/1 2.81 SER84:D.N/1
DG-34:I.OP1/1 2.96 THR85:D.N/1
DG-34:I.OP1/1 2.89 THR85:D.OG1/1
DA-33:I.OP1/1 3.34 ARG83:D.NH2/1
DG-24:I.N3/1 3.23 ARG83:A.NH2/1
DC-23:I.OP1/1 2.46 ARG72:A.NH1/1
DC-23:I.OP1/1 3.08 PHE84:A.N/1
DC-23:I.OP2/1 2.54 ARG72:A.NH2/1
DA-13:I.OP1/1 2.91 ARG36:B.NH2/1
DA-13:I.OP2/1 2.79 ARG36:B.NH1/1
DA-5:I.OP1/1 2.97 ARG42:A.NE/1
DA-5:I.OP1/1 2.97 ARG42:A.NH2/1
DG-3:I.OP1/1 2.84 VAL117:A.N/1
DG-3:I.OP1/1 2.74 THR118:A.N/1
DG-3:I.OP1/1 2.79 THR118:A.OG1/1
DC8:I.OP1/1 2.92 ILE46:F.N/1
DG9:I.OP1/1 2.76 GLY44:E.N/1
DG9:I.OP1/1 3.02 VAL46:E.N/1
DG9:I.OP1/1 3.46 ALA47:E.N/1
DA17:I.OP1/1 3.02 ARG69:E.NH2/1
DC18:I.OP1/1 3.11 LYS64:E.N/1
DC18:I.OP2/1 3.27 LEU65:E.N/1
DG28:I.OP1/1 2.67 LYS79:F.N/1
DT38:I.OP1/1 3.35 ALA45:G.N/1
DA39:I.OP1/1 2.43 VAL43:G.N/1
DA39:I.OP1/1 3.22 VAL43:G.O/1
DG48:I.OP1/1 2.32 TYR37:H.OH/1
DG48:I.N2/1 3.3 ARG30:H.NH1/1
DC49:I.OP1/1 3.24 ARG29:G.NH2/1
DC49:I.OP1/1 3.07 SER33:H.N/1
DC49:I.OP1/1 3.27 SER33:H.O/1
DC49:I.O3'/1 3.29 LYS31:H.N/1
DA50:I.OP1/1 2.97 LYS31:H.N/1
DA57:I.O4'/1 3.18 ARG77:G.NH2/1
DG58:I.OP1/1 2.99 LYS75:G.NZ/1
DG58:I.OP1/1 2.73 THR76:G.N/1
DG58:I.OP1/1 2.67 ARG77:G.N/1
DG58:I.OP2/1 3.16 THR76:G.N/1
DG70:I.OP1/1 2.78 ARG42:A.N/1
DA116:I.OP2/1 2.57 SER53:V.OG/1
DG117:I.OP1/1 3.15 ILE51:V.N/1
DG118:I.OP2/1 2.35 TYR39:V.OH/1
DA126:I.OP1/1 3.15 ARG32:U.NH1/1
DT127:I.OP1/1 2.8 THR16:U.OG1/1
DT127:I.OP1/1 2.94 ARG17:U.N/1
DT127:I.OP2/1 3.05 ARG17:U.NE/1
DT127:I.OP2/1 2.88 ARG17:U.NH2/1
DT128:I.OP1/1 2.77 ARG20:U.NH2/1
DG133:I.N2/1 3.12 ARG42:U.NH2/1
DG136:I.OP1/1 2.85 SER84:V.N/1
DG136:I.OP1/1 2.98 THR85:V.N/1
DA137:I.OP1/1 3.11 ARG83:V.NH2/1
DG146:I.N3/1 3.23 ARG83:S.NH2/1
DC147:I.OP1/1 2.51 ARG72:S.NH1/1
DC147:I.OP1/1 2.9 PHE84:S.N/1
DC147:I.OP2/1 2.67 ARG72:S.NH2/1
DA157:I.OP1/1 2.83 ARG36:T.NH2/1
DA157:I.OP2/1 2.77 ARG36:T.NH1/1
DA165:I.OP1/1 2.91 ARG42:S.NE/1
DA165:I.OP1/1 3.06 ARG42:S.NH2/1
DA165:I.O5'/1 3.1 ARG42:S.NH2/1
DG167:I.OP1/1 2.82 VAL117:S.N/1
DG167:I.OP1/1 2.86 THR118:S.OG1/1
DC178:I.OP1/1 2.83 ILE46:X.N/1
DG179:I.OP1/1 2.82 GLY44:W.N/1
DG179:I.OP1/1 3.04 VAL46:W.N/1
DG179:I.OP1/1 3.35 ALA47:W.N/1
DG179:I.N3/1 2.54 ARG40:W.NH2/1
DC180:I.OP1/1 3.22 TYR41:W.N/1
DA187:I.OP2/1 3.08 ARG69:W.NH2/1
DC188:I.OP1/1 3.14 LYS64:W.N/1
DC188:I.OP2/1 3.08 LEU65:W.N/1
DG198:I.OP1/1 2.74 LYS79:X.N/1
DT208:I.OP1/1 3.4 ALA45:Y.N/1
DA209:I.OP1/1 2.44 VAL43:Y.N/1
DA209:I.OP1/1 3.13 VAL43:Y.O/1
DG218:I.OP1/1 2.3 TYR37:Z.OH/1
DG218:I.N2/1 3.4 ARG30:Z.NH1/1
DC219:I.OP1/1 3.2 ARG29:Y.NH2/1
DC219:I.OP1/1 3.28 SER33:Z.N/1
DC219:I.OP1/1 3.2 SER33:Z.O/1
DA220:I.OP1/1 3.06 LYS31:Z.N/1
DG228:I.OP1/1 2.9 THR76:Y.N/1
DG228:I.OP1/1 2.84 ARG77:Y.N/1
DG228:I.OP2/1 3.13 THR76:Y.OG1/1
DG-236:J.O3'/1 3.21 ARG49:S.NE/1
DA-234:J.OP1/1 2.92 LYS56:S.NZ/1
DG-214:J.OP1/1 3.25 ARG32:Y.NH1/1
DA-213:J.OP1/1 2.93 ARG17:Y.N/1
DA-213:J.OP2/1 3.09 ARG17:Y.NE/1
DG-212:J.OP2/1 2.57 ARG20:Y.NH2/1
DG-205:J.O3'/1 3.14 ARG42:Y.NH1/1
DA-204:J.OP1/1 2.79 SER84:Z.N/1
DG-203:J.OP1/1 3.4 ARG83:Z.NH2/1
DT-193:J.OP1/1 2.81 ARG72:W.NH1/1
DT-193:J.OP1/1 2.86 PHE84:W.N/1
DT-193:J.OP2/1 2.89 ARG72:W.NH2/1
DA-183:J.OP1/1 2.55 ARG63:W.NH1/1
DA-183:J.OP1/1 2.98 ARG36:X.NH2/1
DA-183:J.OP2/1 2.77 ARG36:X.NH1/1
DG-178:J.N2/1 3.1 ARG40:W.NH2/1
DG-175:J.OP1/1 2.57 ARG42:W.NH2/1
DA-173:J.OP1/1 2.61 VAL117:W.N/1
DA-173:J.OP1/1 2.61 THR118:W.N/1
DA-173:J.OP1/1 2.8 THR118:W.OG1/1
DG-162:J.OP1/1 2.51 ILE46:T.N/1
DG-162:J.OP1/1 2.99 ILE46:T.O/1
DG-162:J.OP2/1 3.2 ARG35:T.NH2/1
DG-162:J.O3'/1 3.08 GLY44:S.N/1
DG-162:J.N2/1 3.33 ARG40:S.NH1/1
DT-161:J.OP1/1 2.88 GLY44:S.N/1
DT-161:J.OP1/1 2.89 VAL46:S.N/1
DT-161:J.O2/1 3.19 ARG40:S.NH1/1
DG-160:J.OP1/1 3.17 TYR41:S.N/1
DG-160:J.O4'/1 3.23 ARG40:S.NH2/1
DA-153:J.OP1/1 3.15 ARG69:S.NH2/1
DG-152:J.OP1/1 2.84 LYS64:S.N/1
DG-152:J.OP2/1 3.01 LEU65:S.N/1
DA-142:J.OP1/1 2.55 LYS79:T.N/1
DA-142:J.OP1/1 2.57 THR80:T.N/1
DC-140:J.OP1/1 3.02 SER29:Z.OG/1
DG-132:J.OP1/1 3.38 ALA45:U.N/1
DG-132:J.N3/1 3.07 ARG42:U.NH2/1
DA-131:J.OP1/1 2.46 VAL43:U.N/1
DA-131:J.OP2/1 3.02 ARG35:U.NE/1
DA-131:J.OP2/1 2.54 ARG35:U.NH2/1
DG-122:J.OP1/1 2.23 TYR37:V.OH/1
DC-121:J.OP1/1 3.26 ARG29:U.NH1/1
DC-121:J.OP1/1 3.22 SER33:V.N/1
DG-120:J.OP1/1 3.08 SER29:V.O/1
DG-120:J.OP1/1 2.8 LYS31:V.N/1
DG-120:J.OP1/1 3.29 LYS31:V.O/1
DG-113:J.O3'/1 3.38 ARG77:U.NE/1
DG-113:J.N3/1 3.59 ARG77:U.NH2/1
DC-112:J.OP1/1 2.83 THR76:U.N/1
DC-112:J.OP1/1 3.13 ARG77:U.N/1
DG-66:J.O3'/1 3.24 ARG49:A.NE/1
DA-64:J.OP1/1 2.9 LYS56:A.NZ/1
DC-54:J.OP1/1 3.07 SER53:H.N/1
DC-54:J.OP1/1 3.01 SER53:H.OG/1
DA-53:J.OP2/1 2.31 TYR39:H.OH/1
DG-44:J.OP1/1 2.96 ARG32:G.NH1/1
DA-43:J.OP1/1 3.09 ARG17:G.N/1
DA-43:J.OP2/1 3.14 ARG17:G.NE/1
DG-42:J.OP1/1 3.21 ARG20:G.NH2/1
DG-42:J.OP2/1 2.84 ARG20:G.NH2/1
DG-35:J.O3'/1 3.28 ARG42:G.NH1/1
DA-34:J.OP1/1 2.78 SER84:H.N/1
DA-34:J.OP1/1 3.11 SER84:H.OG/1
DT-23:J.OP1/1 2.88 ARG72:E.NH1/1
DT-23:J.OP1/1 2.64 PHE84:E.N/1
DT-23:J.OP2/1 2.85 ARG72:E.NH2/1
DT-23:J.O4'/1 3.32 ARG83:E.NH1/1
DA-13:J.OP1/1 2.45 ARG63:E.NH1/1
DA-13:J.OP1/1 2.82 ARG36:F.NH2/1
DA-13:J.OP2/1 2.77 ARG36:F.NH1/1
DG-8:J.N2/1 3.09 ARG40:E.NH2/1
DG-5:J.OP1/1 2.95 ARG42:E.NH1/1
DA-3:J.OP1/1 2.49 VAL117:E.N/1
DA-3:J.OP1/1 2.54 THR118:E.N/1
DA-3:J.OP1/1 2.9 THR118:E.OG1/1
DC7:J.OP1/1 3.02 GLY48:B.N/1
DG8:J.OP1/1 2.65 ILE46:B.N/1
DG8:J.OP1/1 3.1 ILE46:B.O/1
DG8:J.OP2/1 3.26 ARG35:B.NH2/1
DG8:J.N2/1 3.07 ARG40:A.NH1/1
DT9:J.OP1/1 3.02 GLY44:A.N/1
DT9:J.OP1/1 3.18 VAL46:A.N/1
DT9:J.O2/1 3.03 ARG40:A.NH1/1
DG10:J.OP1/1 3.29 TYR41:A.N/1
DA17:J.OP1/1 3.15 ARG69:A.NH2/1
DG18:J.OP1/1 3.15 LYS64:A.N/1
DG18:J.OP2/1 3.25 LEU65:A.N/1
DG27:J.OP1/1 3.32 LYS79:B.NZ/1
DA28:J.OP1/1 2.53 LYS79:B.N/1
DG38:J.OP1/1 3.3 ALA45:C.N/1
DA39:J.OP1/1 2.49 VAL43:C.N/1
DA39:J.OP2/1 3.14 ARG35:C.NE/1
DA39:J.OP2/1 2.45 ARG35:C.NH2/1
DG48:J.OP1/1 2.27 TYR37:D.OH/1
DC49:J.OP1/1 3.09 SER33:D.N/1
DC49:J.OP1/1 3.04 SER33:D.O/1
DG50:J.OP1/1 2.59 LYS31:D.N/1
DG51:J.O5'/1 1.73 ARG28:D.NH1/1
DG57:J.OP1/1 2.95 THR76:C.OG1/1
DG57:J.O5'/1 2.7 THR76:C.OG1/1
DG57:J.O3'/1 2.9 ARG77:C.NH2/1
DC116:J.OP1/1 3.03 SER53:R.N/1
DC116:J.OP1/1 3.06 SER53:R.OG/1
DG126:J.OP1/1 3.13 ARG32:Q.NH1/1
DA127:J.OP1/1 3.05 ARG17:Q.N/1
DA127:J.OP2/1 3.13 ARG17:Q.NE/1
DG128:J.OP2/1 2.56 ARG20:Q.NH2/1
DG135:J.O3'/1 3.37 ARG42:Q.NH1/1
DA136:J.OP1/1 2.69 SER84:R.N/1
DA136:J.OP1/1 3.04 SER84:R.OG/1
DG137:J.OP1/1 3.26 ARG83:R.NH2/1
DT147:J.OP1/1 2.88 ARG72:O.NH1/1
DT147:J.OP1/1 2.86 PHE84:O.N/1
DT147:J.OP2/1 2.91 ARG72:O.NH2/1
DA157:J.OP1/1 2.46 ARG63:O.NH1/1
DA157:J.OP1/1 2.66 ARG36:P.NH2/1
DA157:J.OP2/1 2.49 ARG36:P.NH1/1
DG162:J.N2/1 2.97 ARG40:O.NH2/1
DG165:J.OP1/1 2.89 ARG42:O.NH2/1
DA167:J.OP1/1 2.6 VAL117:O.N/1
DA167:J.OP1/1 2.61 THR118:O.N/1
DA167:J.OP1/1 2.84 THR118:O.OG1/1
DC177:J.OP1/1 2.98 GLY48:L.N/1
DG178:J.OP1/1 2.51 ILE46:L.N/1
DG178:J.OP1/1 3.03 ILE46:L.O/1
DG178:J.OP2/1 3.26 ARG35:L.NH1/1
DG178:J.OP2/1 3.16 ARG35:L.NH2/1
DG178:J.O3'/1 3.07 GLY44:K.N/1
DG178:J.N2/1 3.25 ARG40:K.NH1/1
DT179:J.OP1/1 2.85 GLY44:K.N/1
DT179:J.OP1/1 2.94 VAL46:K.N/1
DT179:J.O2/1 3.22 ARG40:K.NH1/1
DG180:J.OP1/1 2.55 TYR41:K.N/1
DG180:J.O4'/1 3.09 ARG40:K.NH2/1
DA187:J.OP1/1 3.27 ARG69:K.NH2/1
DG188:J.OP1/1 2.85 LYS64:K.N/1
DG188:J.OP2/1 3.02 LEU65:K.N/1
DG197:J.OP1/1 3.24 LYS79:L.NZ/1
DA198:J.OP1/1 2.55 LYS79:L.N/1
DA209:J.OP1/1 2.45 VAL43:M.N/1
DA209:J.OP2/1 3.06 ARG35:M.NE/1
DA209:J.OP2/1 2.48 ARG35:M.NH2/1
DG218:J.OP1/1 2.21 TYR37:N.OH/1
DC219:J.OP1/1 3.27 SER33:N.N/1
DG220:J.OP1/1 2.95 SER29:N.O/1
DG220:J.OP1/1 2.65 LYS31:N.N/1
DG227:J.O3'/1 3.45 ARG77:M.NE/1
DG227:J.N3/1 3.46 ARG77:M.NH2/1
DC228:J.OP1/1 2.68 THR76:M.N/1
DC228:J.OP1/1 3.14 ARG77:M.N/1
DG240:J.OP1/1 3.27 ARG42:O.N/1
DG240:J.OP1/1 2.81 THR45:O.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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