Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA6:P.OP2/1 3.22 LYS339:A.NZ/1
DA7:P.OP2/1 3.11 THR301:A.N/1
DA7:P.OP2/1 2.52 THR301:A.OG1/1
DG8:P.OP2/1 2.83 GLY299:A.N/1
DG9:P.OP1/1 2.96 ARG298:A.NH1/1
DG9:P.OP2/1 3.01 SER297:A.N/1
DT12:P.OP1/1 2.83 GLY187:A.N/1
DT12:P.OP1/1 2.37 THR190:A.OG1/1
DT12:P.OP2/1 3.02 ILE189:A.N/1
DC13:P.OP1/1 3.1 GLY185:A.N/1
DC14:P.O3'/1 3.02 ASP105:A.OD2/1
DG2:T.OP1/1 2.46 SER34:A.OG/1
DG2:T.OP1/1 2.61 SER40:A.OG/1
DG2:T.OP2/1 2.99 ARG331:A.NH2/1
DG2:T.O5'/1 3.42 ARG332:A.NH2/1
DG3:T.OP2/1 2.51 THR250:A.OG1/1
DA4:T.OP2/1 2.7 ILE248:A.N/1
DA5:T.OP2/1 2.88 GLY246:A.N/1
DA5:T.OP2/1 2.92 ARG336:A.NH1/1
DA5:T.OP2/1 2.8 ARG336:A.NH2/1
DA5:T.O5'/1 3.2 ARG336:A.NH1/1
DA5:T.O3'/1 2.94 ARG242:A.NH1/1
DT6:T.OP1/1 2.99 ARG242:A.NH1/1
DT6:T.OP1/1 2.8 LYS243:A.N/1
DT6:T.OP2/1 2.85 SER244:A.N/1
DC8:T.OP1/1 2.82 LYS221:A.NZ/1
DT9:T.OP2/1 3.46 ALA220:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA7:P.OP1/1 2.38 101:P/1 3.08 GLY299:A.O/1
DC14:P.OP1/1 3.01 521:A/1 2.77 ASP7:A.OD2/1
DC14:P.OP1/1 3.01 521:A/1 3.07 LYS152:A.NZ/1
DC14:P.O3'/1 2.51 102:P/1 2.8 TYR12:A.N/1
DC14:P.O3'/1 2.51 102:P/1 2.88 THR45:A.OG1/1
DC14:P.O2/1 2.85 518:A/1 2.74 TYR12:A.OH/1
DT6:T.O3'/1 2.62 105:T/1 3.05 ARG240:A.NH1/1
DC7:T.OP1/1 2.66 105:T/1 3.05 ARG240:A.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text