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Nucleic atom dist Protein atom
DA34:I.OP1/1 2.58 SER56:N.N/1
DG35:I.OP2/1 2.03 TYR42:N.OH/1
DA44:I.OP1/1 3.24 ARG32:M.NE/1
DT45:I.OP1/1 2.96 ARG17:M.N/1
DT45:I.OP2/1 2.81 ARG17:M.NE/1
DT45:I.OP2/1 2.91 ARG17:M.NH2/1
DA53:I.O3'/1 2.91 THR88:N.OG1/1
DG54:I.OP1/1 2.8 SER87:N.N/1
DG54:I.OP1/1 2.75 THR88:N.N/1
DG54:I.OP1/1 2.83 THR88:N.OG1/1
DA55:I.OP2/1 3.04 ARG86:N.NH2/1
DC61:I.OP1/1 2.81 LYS30:R.NZ/1
DA63:I.OP2/1 3.26 ARG31:R.NH2/1
DG64:I.OP2/1 3.04 SER86:K.N/1
DC65:I.OP1/1 2.76 ARG72:K.NH1/1
DC65:I.OP1/1 3.06 PHE84:K.N/1
DC65:I.OP2/1 3.04 ARG72:K.NH2/1
DA75:I.OP1/1 3.02 ARG36:L.NH2/1
DA75:I.OP2/1 2.87 ARG36:L.NH1/1
DA83:I.OP1/1 2.62 ARG42:K.NE/1
DG85:I.OP1/1 2.62 VAL117:K.N/1
DG85:I.OP1/1 3.06 THR118:K.N/1
DG85:I.OP1/1 2.96 THR118:K.OG1/1
DC95:I.OP2/1 2.9 GLY48:P.N/1
DC96:I.OP1/1 2.91 ILE46:P.N/1
DC96:I.OP1/1 3.17 ILE46:P.O/1
DC96:I.OP2/1 3.14 ARG35:P.NH2/1
DC96:I.O3'/1 3.15 GLY44:O.N/1
DG97:I.OP1/1 2.85 GLY44:O.N/1
DG97:I.OP1/1 2.99 VAL46:O.N/1
DG97:I.OP1/1 3.21 ALA47:O.N/1
DC98:I.OP1/1 2.55 TYR41:O.N/1
DA105:I.OP1/1 2.9 ARG69:O.NH2/1
DA105:I.O3'/1 3.21 ARG63:O.NH2/1
DC106:I.OP1/1 3.01 LYS64:O.N/1
DA116:I.OP1/1 2.34 LYS79:P.N/1
DA116:I.OP1/1 2.71 THR80:P.N/1
DA116:I.OP1/1 3.17 THR80:P.OG1/1
DG118:I.OP1/1 2.72 SER32:N.OG/1
DT126:I.OP1/1 3.44 ALA45:Q.N/1
DA127:I.OP1/1 2.88 VAL43:Q.N/1
DG136:I.OP1/1 3.22 TYR40:R.OH/1
DG136:I.N2/1 3.46 ARG33:R.NH2/1
DC137:I.OP1/1 2.99 ARG29:Q.NH1/1
DC137:I.OP1/1 2.86 ARG29:Q.NH2/1
DC137:I.OP1/1 3.1 SER36:R.N/1
DA138:I.OP1/1 2.52 LYS34:R.N/1
DA138:I.O3'/1 3.43 LYS30:R.N/1
DC139:I.OP1/1 3.4 LYS30:R.N/1
DA145:I.O4'/1 2.74 ARG77:Q.NH2/1
DG146:I.OP1/1 2.78 ARG77:Q.N/1
DG146:I.OP2/1 2.64 THR76:Q.N/1
DG146:I.OP2/1 2.64 THR76:Q.OG1/1
DA158:I.OP2/1 2.69 THR45:K.OG1/1
DA159:I.OP1/1 3.1 ARG40:K.O/1
DA210:I.OP2/1 3.18 SER56:H.N/1
DG211:I.OP1/1 2.7 ARG77:G.NE/1
DA220:I.OP1/1 3.34 ARG32:G.NE/1
DT221:I.OP1/1 2.51 ARG17:G.N/1
DT221:I.OP2/1 2.89 ARG17:G.NE/1
DT221:I.O3'/1 2.97 ARG20:G.NH2/1
DT222:I.OP2/1 2.74 ARG20:G.NH2/1
DA229:I.O4'/1 3.05 ARG42:G.NH1/1
DA229:I.O3'/1 2.86 THR88:H.OG1/1
DG230:I.OP1/1 3.3 THR88:H.N/1
DG240:I.OP2/1 3.29 SER86:E.N/1
DC241:I.OP1/1 2.65 ARG72:E.NH1/1
DC241:I.OP2/1 2.88 ARG72:E.NH2/1
DA251:I.OP1/1 3.08 THR30:F.OG1/1
DA251:I.OP1/1 2.8 ARG36:F.NH2/1
DA251:I.OP2/1 2.96 ARG36:F.NH1/1
DG261:I.OP1/1 2.57 VAL117:E.N/1
DG261:I.OP1/1 2.65 THR118:E.N/1
DG261:I.OP1/1 2.7 THR118:E.OG1/1
DC271:I.OP2/1 2.81 GLY48:B.N/1
DC272:I.OP1/1 3.27 ILE46:B.N/1
DC272:I.OP2/1 2.85 ARG35:B.NH2/1
DC272:I.O3'/1 2.84 GLY44:A.N/1
DG273:I.OP1/1 2.96 GLY44:A.N/1
DG273:I.OP1/1 2.88 VAL46:A.N/1
DG273:I.OP1/1 3.42 ALA47:A.N/1
DC274:I.OP1/1 2.82 TYR41:A.N/1
DA281:I.OP1/1 2.46 ARG69:A.NH2/1
DA281:I.O4'/1 2.97 ARG63:A.NH1/1
DC282:I.OP1/1 3.24 LYS64:A.N/1
DC282:I.OP2/1 3.21 LEU65:A.N/1
DA292:I.OP1/1 2.39 LYS79:B.N/1
DA292:I.OP1/1 2.56 THR80:B.N/1
DA292:I.OP1/1 3.07 THR80:B.OG1/1
DG294:I.OP1/1 2.28 SER32:H.OG/1
DT302:I.OP1/1 3.16 ALA45:C.N/1
DT302:I.O4'/1 2.38 ARG42:C.NH2/1
DA303:I.OP1/1 3.18 GLU41:C.O/1
DA303:I.OP1/1 3.03 VAL43:C.N/1
DG312:I.OP1/1 2.58 TYR40:D.OH/1
DG312:I.N2/1 3.32 ARG33:D.NH2/1
DA314:I.OP1/1 2.79 ARG33:D.N/1
DA314:I.OP1/1 2.78 LYS34:D.N/1
DC315:I.OP2/1 2.4 ARG31:D.NH2/1
DA321:I.O4'/1 3.09 ARG77:C.NH2/1
DG322:I.OP1/1 2.74 THR76:C.N/1
DG322:I.OP1/1 3.22 THR76:C.OG1/1
DG322:I.OP1/1 3.22 ARG77:C.N/1
DA334:I.OP2/1 3.4 ARG42:E.N/1
DA334:I.OP2/1 2.97 THR45:E.OG1/1
DG24:J.OP1/1 2.3 LYS56:E.NZ/1
DC34:J.OP1/1 2.72 SER56:D.N/1
DC34:J.O4'/1 3.26 ARG77:C.NH1/1
DC34:J.O3'/1 2.7 TYR42:D.OH/1
DG44:J.OP1/1 2.4 ARG32:C.NE/1
DA45:J.OP2/1 3.28 ARG17:C.NH2/1
DA53:J.O3'/1 2.96 THR88:D.OG1/1
DA54:J.OP1/1 2.41 SER87:D.N/1
DA54:J.OP1/1 2.98 THR88:D.N/1
DG64:J.OP2/1 3.06 SER86:A.N/1
DT65:J.OP1/1 2.79 ARG72:A.NH1/1
DT65:J.OP1/1 2.6 PHE84:A.N/1
DT65:J.OP2/1 2.79 ARG72:A.NH2/1
DA75:J.OP1/1 2.67 ARG36:B.NH2/1
DA75:J.OP2/1 3.05 ARG36:B.NH1/1
DA85:J.OP1/1 2.88 VAL117:A.N/1
DA85:J.OP1/1 2.55 THR118:A.OG1/1
DC95:J.OP1/1 2.97 SER47:F.OG/1
DC95:J.OP2/1 3.3 GLY48:F.N/1
DG96:J.OP1/1 2.95 ILE46:F.N/1
DG96:J.OP2/1 3.17 ARG35:F.NH1/1
DG96:J.O3'/1 3.26 GLY44:E.N/1
DT97:J.OP1/1 2.67 GLY44:E.N/1
DT97:J.OP1/1 3.17 VAL46:E.N/1
DT97:J.OP1/1 3.2 ALA47:E.N/1
DT97:J.O2/1 2.9 ARG40:E.NH1/1
DG98:J.OP1/1 3.13 TYR41:E.N/1
DA105:J.OP2/1 2.84 ARG69:E.NH1/1
DG106:J.OP1/1 2.59 LYS64:E.N/1
DA116:J.OP1/1 2.72 LYS79:F.N/1
DA116:J.OP1/1 2.84 THR80:F.N/1
DA116:J.OP1/1 3.01 THR80:F.OG1/1
DG126:J.OP1/1 2.78 ALA45:G.N/1
DA127:J.OP1/1 2.33 VAL43:G.N/1
DA127:J.OP1/1 3.06 VAL43:G.O/1
DC137:J.OP1/1 3.05 ARG29:G.NH1/1
DC137:J.OP1/1 2.79 ARG29:G.NH2/1
DG138:J.OP1/1 2.33 LYS34:H.N/1
DG138:J.OP1/1 2.8 LYS34:H.O/1
DC146:J.OP1/1 2.86 ARG77:G.N/1
DC146:J.OP2/1 2.95 THR76:G.N/1
DA158:J.OP1/1 2.59 ARG42:A.N/1
DA158:J.OP1/1 3.21 THR45:A.OG1/1
DC210:J.OP1/1 2.58 SER56:R.N/1
DA211:J.OP2/1 2.79 TYR42:R.OH/1
DA211:J.OP2/1 3.44 ILE54:R.N/1
DG220:J.OP2/1 2.54 ARG32:Q.NE/1
DA221:J.OP2/1 3.3 ARG17:Q.NE/1
DA221:J.OP2/1 2.98 ARG17:Q.NH2/1
DG222:J.OP1/1 2.63 LYS15:Q.O/1
DG222:J.OP2/1 3.24 LYS15:Q.NZ/1
DA223:J.OP2/1 2.51 LYS13:Q.NZ/1
DA230:J.OP1/1 2.94 SER87:R.N/1
DA230:J.OP1/1 2.94 THR88:R.N/1
DA230:J.OP1/1 2.98 THR88:R.OG1/1
DG231:J.OP2/1 2.76 ARG86:R.NH2/1
DG240:J.OP2/1 3.41 SER86:O.N/1
DT241:J.OP1/1 2.65 ARG72:O.NH1/1
DT241:J.OP1/1 3.28 PHE84:O.N/1
DT241:J.OP2/1 2.84 ARG72:O.NH2/1
DA251:J.OP1/1 2.89 ARG36:P.NH2/1
DA251:J.OP2/1 3.3 ARG36:P.NH1/1
DA261:J.OP1/1 2.8 VAL117:O.N/1
DA261:J.OP1/1 3 THR118:O.N/1
DA261:J.OP1/1 2.69 THR118:O.OG1/1
DC271:J.OP2/1 3.37 GLY48:L.N/1
DG272:J.OP1/1 2.99 ILE46:L.N/1
DG272:J.OP2/1 3.09 ARG35:L.NH1/1
DG272:J.O3'/1 2.98 GLY44:K.N/1
DG272:J.N2/1 3.4 ARG40:K.NH1/1
DT273:J.OP1/1 3.08 GLY44:K.N/1
DT273:J.OP1/1 2.54 VAL46:K.N/1
DT273:J.OP1/1 3.01 ALA47:K.N/1
DT273:J.O4'/1 3.02 ARG40:K.NH1/1
DT273:J.O3'/1 3.2 TYR41:K.N/1
DT273:J.O3'/1 3.18 TYR41:K.O/1
DT273:J.O2/1 3.34 ARG40:K.NH1/1
DG274:J.OP1/1 3.12 TYR41:K.N/1
DA281:J.OP1/1 2.97 ARG69:K.NH2/1
DA281:J.OP2/1 3.2 ARG69:K.NH1/1
DA292:J.OP1/1 2.52 LYS79:L.N/1
DA292:J.OP1/1 2.97 THR80:L.OG1/1
DG302:J.OP1/1 2.87 ALA45:M.N/1
DA303:J.OP1/1 2.79 VAL43:M.N/1
DG312:J.OP1/1 3.02 TYR40:N.OH/1
DC313:J.OP1/1 3.37 ARG29:M.NH2/1
DG314:J.OP1/1 2.39 LYS34:N.N/1
DG315:J.OP1/1 3.02 ARG31:N.N/1
DG315:J.OP2/1 3.32 ARG31:N.NH1/1
DC322:J.OP1/1 3.11 THR76:M.N/1
DC322:J.OP1/1 2.9 ARG77:M.N/1
DT334:J.OP1/1 2.78 ARG42:O.N/1
DT334:J.OP1/1 2.6 THR45:O.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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