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Nucleic atom dist Protein atom
DC6:T.OP2/1 2.97 LYS280:A.NZ/1
DC6:T.O2/1 3.02 ARG283:A.NH1/1
DA7:T.OP1/1 2.71 THR292:A.OG1/1
DA8:T.OP1/1 2.95 ASN294:A.ND2/1
DG9:T.OP1/1 2.63 TYR296:A.OH/1
DC10:T.OP1/1 2.94 THR233:A.N/1
DC10:T.OP1/1 2.89 LYS234:A.N/1
DA11:T.OP1/1 3.02 LYS230:A.N/1
DC8:P.OP1/1 3.16 GLY107:A.N/1
DC8:P.OP1/1 2.81 ALA110:A.N/1
DC8:P.OP2/1 2.98 SER109:A.N/1
DT9:P.OP1/1 2.78 GLY105:A.N/1
2DT10:P.OP1/1 2.72 ARG254:A.NH2/1
DT1:D.OP1/1 2.8 LYS68:A.NZ/1
DT2:D.OP1/1 2.91 GLY66:A.N/1
DT2:D.OP1/1 2.87 ILE69:A.N/1
DT2:D.OP2/1 3.21 LYS68:A.N/1
DC3:D.OP1/1 2.87 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:T.N4/1 3.09 236:T/1 3.14 ASN37:A.OD1/1
DC6:T.N4/1 3.09 236:T/1 3.25 ASN37:A.ND2/1
DA7:T.OP1/1 2.8 219:T/1 2.89 ARG283:A.O/1
DA7:T.OP1/1 2.8 219:T/1 2.96 ILE293:A.N/1
DA7:T.N3/1 2.96 551:A/1 2.81 ARG283:A.NH1/1
DA7:T.N3/1 2.96 551:A/1 3.2 ARG283:A.NH2/1
DA7:T.N3/1 2.96 551:A/1 2.64 GLU295:A.OE1/1
DA8:T.N3/1 2.7 211:T/1 2.95 LYS234:A.NZ/1
DG9:T.O4'/1 3.19 211:T/1 2.95 LYS234:A.NZ/1
DC10:T.OP2/1 2.75 214:T/1 3 GLU232:A.N/1
DC10:T.OP2/1 2.8 220:T/1 3.07 THR233:A.OG1/1
DA11:T.OP1/1 2.96 231:T/1 2.98 LYS230:A.O/1
DA11:T.OP2/1 2.78 217:T/1 2.95 LYS230:A.O/1
DA11:T.O3'/1 3.17 225:T/1 2.99 HIS135:A.N/1
DT12:T.OP1/1 2.62 205:T/1 2.82 HIS134:A.N/1
DT12:T.OP1/1 2.92 225:T/1 2.99 HIS135:A.N/1
DT9:P.OP2/1 2.8 211:P/1 3.26 LYS27:A.NZ/1
DT9:P.O2/1 2.64 205:P/1 3.07 LYS234:A.NZ/1
2DT10:P.OP1/1 3.07 593:A/1 2.74 SER104:A.OG/1
2DT10:P.OP1/1 2.79 601:A/1 2.75 ASP190:A.OD2/1
2DT10:P.OP1/1 3.07 593:A/1 2.88 ARG254:A.NE/1
2DT10:P.O4'/1 2.63 205:P/1 3.07 LYS234:A.NZ/1
DT1:D.OP1/1 2.96 206:D/1 2.96 TYR39:A.OH/1
DT1:D.OP2/1 2.4 202:D/1 3.27 LYS35:A.NZ/1
DT1:D.OP2/1 3.2 522:A/1 2.54 LYS68:A.NZ/1
DC3:D.OP2/1 2.56 204:D/1 3.33 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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