Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA7:O.O3'/1 3.27 TYR41:G.OH/1
DA20:O.OP1/1 2.37 SER53:N.N/1
DT27:O.O3'/1 2.68 ARG30:N.NH2/1
DC28:O.OP1/1 2.45 ARG30:N.NH1/1
DA30:O.OP1/1 2.69 ARG32:M.NE/1
DA30:O.OP1/1 2.92 ARG32:M.NH2/1
DT31:O.OP1/1 2.7 THR16:M.OG1/1
DT31:O.OP1/1 2.75 ARG17:M.N/1
DT31:O.OP2/1 2.56 ARG17:M.NE/1
DT32:O.OP1/1 3.19 LYS15:M.N/1
DT32:O.OP1/1 2.26 ARG20:M.NH2/1
DG40:O.OP1/1 2.81 SER84:N.N/1
DG40:O.OP1/1 3.17 THR85:N.N/1
DG40:O.OP1/1 2.73 THR85:N.OG1/1
DA41:O.OP1/1 3.13 ARG83:N.NH1/1
DA41:O.OP2/1 2.36 ARG83:N.NH2/1
DG50:O.O5'/1 3.23 PHE84:K.O/1
DC51:O.OP1/1 2.9 ARG72:K.NH1/1
DC51:O.OP1/1 2.47 PHE84:K.N/1
DC51:O.OP1/1 3.13 PHE84:K.O/1
DC51:O.OP2/1 2.66 ARG72:K.NH2/1
DC51:O.O5'/1 3.08 ARG72:K.NH1/1
DA61:O.OP1/1 2.57 ARG36:L.NH2/1
DA61:O.OP2/1 2.6 ARG36:L.NH1/1
DG71:O.OP1/1 2.46 VAL117:K.N/1
DC81:O.OP1/1 3.14 SER47:H.OG/1
DC81:O.OP2/1 3.42 GLY48:H.N/1
DC81:O.O5'/1 3.27 ILE46:H.O/1
DC82:O.OP1/1 2.59 ILE46:H.N/1
DC82:O.OP1/1 3.2 ILE46:H.O/1
DC82:O.O5'/1 3.32 ARG35:H.NH2/1
DC82:O.O3'/1 3.14 GLY44:G.N/1
DG83:O.OP1/1 2.37 GLY44:G.N/1
DC84:O.OP1/1 3.14 TYR41:G.N/1
DA91:O.OP2/1 2.6 ARG69:G.NH1/1
DA91:O.OP2/1 2.91 ARG69:G.NH2/1
DC92:O.OP1/1 2.61 LYS64:G.N/1
DC92:O.OP2/1 2.47 LEU65:G.N/1
DG102:O.OP1/1 2.3 LYS79:H.N/1
DG102:O.OP1/1 2.95 THR80:H.N/1
DT104:O.OP1/1 2.54 THR29:N.OG1/1
DT112:O.OP1/1 2.63 ALA45:I.N/1
DA113:O.OP1/1 2.35 VAL43:I.N/1
DA113:O.OP1/1 3 VAL43:I.O/1
DC123:O.OP1/1 3.15 ARG29:I.NH1/1
DA131:O.O4'/1 2.55 ARG77:I.NH2/1
DG132:O.OP1/1 2.37 THR76:I.N/1
DG132:O.OP1/1 3.05 ARG77:I.N/1
DC144:O.OP1/1 2.35 ARG42:K.N/1
DC144:O.OP1/1 3.12 THR45:K.OG1/1
DG145:O.OP2/1 2.31 ARG42:K.NH1/1
DC20:P.OP1/1 2.3 SER52:J.OG/1
DC20:P.OP1/1 2.41 SER53:J.N/1
DG30:P.OP1/1 2.68 ARG32:I.NH2/1
DG30:P.OP2/1 3.15 ARG32:I.NH1/1
DA31:P.OP1/1 3.18 ARG17:I.N/1
DA31:P.OP2/1 2.52 ARG17:I.NH1/1
DA31:P.OP2/1 3.05 ARG17:I.NH2/1
DG32:P.OP1/1 3.07 LYS13:I.O/1
DG32:P.OP1/1 2.9 LYS15:I.N/1
DG32:P.OP1/1 2.88 LYS15:I.O/1
DG32:P.OP1/1 2.34 ARG20:I.NH2/1
DA33:P.OP1/1 2.55 ALA12:I.N/1
DG39:P.O4'/1 3.2 ARG42:I.NH2/1
DA40:P.OP1/1 2.82 SER84:J.N/1
DA40:P.OP1/1 2.86 THR85:J.N/1
DA40:P.OP1/1 2.64 THR85:J.OG1/1
DG41:P.OP2/1 3.12 ARG83:J.NE/1
DT50:P.OP1/1 3.2 SER86:G.N/1
DT51:P.OP1/1 2.53 ARG72:G.NH1/1
DT51:P.OP1/1 2.93 PHE84:G.N/1
DT51:P.OP2/1 2.73 ARG72:G.NH2/1
DA61:P.OP1/1 2.41 ARG36:H.NH2/1
DA61:P.OP2/1 2.33 ARG36:H.NH1/1
DC63:P.OP1/1 3.11 ARG272:A.NH2/1
DG64:P.OP1/1 3.3 ARG272:A.NE/1
DG64:P.OP2/1 3.04 ARG272:A.NH1/1
DA71:P.OP1/1 2.44 VAL117:G.N/1
DA71:P.OP1/1 2.84 THR118:G.N/1
DC81:P.OP1/1 2.79 SER47:L.OG/1
DC81:P.OP1/1 2.8 GLY48:L.N/1
DC81:P.O5'/1 3 ILE46:L.O/1
DC81:P.O4'/1 2.89 ARG45:L.NH2/1
DG82:P.OP1/1 2.8 ILE46:L.N/1
DG82:P.OP1/1 3.14 ILE46:L.O/1
DG82:P.O5'/1 2.73 ARG35:L.NH2/1
DG82:P.O3'/1 3.12 GLY44:K.N/1
DG82:P.N2/1 3.39 ARG40:K.NH2/1
DT83:P.OP1/1 2.55 GLY44:K.N/1
DT83:P.OP1/1 3.14 VAL46:K.N/1
DT83:P.O2/1 3.22 ARG40:K.NH1/1
DG84:P.OP1/1 2.91 TYR41:K.N/1
DA91:P.OP1/1 2.62 ARG69:K.NH2/1
DA91:P.OP2/1 3 ARG69:K.NH1/1
DG92:P.OP1/1 2.65 LYS64:K.N/1
DG92:P.OP2/1 2.79 LEU65:K.N/1
DA100:P.O3'/1 2.42 ARG83:K.NH2/1
DA102:P.OP1/1 2.24 LYS79:L.N/1
DA102:P.OP1/1 3.07 THR80:L.N/1
DC104:P.OP1/1 2.99 THR29:J.OG1/1
DG112:P.O4'/1 2.51 ARG42:M.NH2/1
DA113:P.OP1/1 3.12 VAL43:M.N/1
DG122:P.OP1/1 2.56 TYR37:N.OH/1
DC123:P.OP1/1 3.07 ARG29:M.NH1/1
DG124:P.OP1/1 2.65 LYS31:N.N/1
DG131:P.O3'/1 2.42 THR76:M.OG1/1
DC132:P.OP1/1 2.43 THR76:M.N/1
DC132:P.OP1/1 2.93 THR76:M.OG1/1
DC132:P.OP1/1 2.9 ARG77:M.N/1
DA133:P.OP2/1 2.62 LYS75:M.NZ/1
DC144:P.OP1/1 2.8 ARG42:G.N/1
DG145:P.OP2/1 2.59 ARG42:G.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text