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Nucleic atom dist Protein atom
DC25:I.O5'/1 3.36 ARG33:C.NH1/1
DA27:I.OP1/1 2.53 THR17:C.OG1/1
DA27:I.OP1/1 2.75 ARG18:C.N/1
DA27:I.OP2/1 2.68 ARG18:C.NE/1
DA28:I.OP1/1 2.97 LYS16:C.O/1
DA28:I.OP2/1 2.98 ARG21:C.NH1/1
DA35:I.O3'/1 2.38 THR89:D.OG1/1
DT36:I.OP1/1 2.91 SER88:D.N/1
DT36:I.OP1/1 2.43 THR89:D.N/1
DT37:I.OP1/1 2.99 ARG87:D.NH2/1
DC44:I.OP1/1 2.39 LYS31:H.NZ/1
DG46:I.O3'/1 3.23 ARG84:A.NE/1
DG46:I.N3/1 3.12 ARG84:A.NH2/1
DC47:I.OP1/1 2.37 ARG73:A.NH1/1
DC47:I.OP2/1 2.46 ARG73:A.NH2/1
DT48:I.O2/1 2.02 GLN335:L.OE1/1
DC49:I.O3'/1 2.52 TYR356:L.OH/1
DA51:I.OP1/1 2.32 ILE394:L.N/1
DA56:I.OP1/1 2.82 ARG64:A.NH1/1
DG58:I.OP1/1 2.53 ARG24:B.NH1/1
DA67:I.OP1/1 2.74 VAL118:A.N/1
DA67:I.OP1/1 2.73 THR119:A.N/1
DA67:I.OP1/1 2.56 THR119:A.OG1/1
DG77:I.OP2/1 2.94 GLY49:F.N/1
DG77:I.O4'/1 3.22 ARG46:F.NH2/1
DC78:I.OP1/1 2.89 ILE47:F.N/1
DC78:I.OP2/1 2.46 ARG36:F.NH2/1
DT79:I.OP1/1 3.16 GLY45:E.N/1
DT79:I.OP1/1 2.84 ALA48:E.N/1
DT79:I.O3'/1 2.79 ARG41:E.NH2/1
DC87:I.OP2/1 3.11 ARG70:E.NH2/1
DC88:I.OP1/1 3.46 ARG64:E.NH2/1
DA98:I.OP1/1 2.3 THR81:F.OG1/1
DA108:I.O3'/1 3.05 VAL44:G.N/1
DA109:I.OP1/1 2.66 VAL44:G.N/1
DT116:I.OP1/1 2.49 LYS14:G.NZ/1
DT118:I.OP1/1 2.52 TYR41:H.OH/1
DT118:I.O5'/1 2.56 TYR41:H.OH/1
DT118:I.O2/1 3.04 ARG34:H.NH2/1
DT119:I.OP1/1 2.44 SER37:H.N/1
DT119:I.OP1/1 2.64 SER37:H.O/1
DG120:I.OP1/1 3.17 LYS35:H.N/1
DG120:I.OP2/1 2.85 LYS35:H.O/1
DG120:I.O3'/1 2.51 ARG32:H.NH2/1
DC128:I.OP1/1 3.34 THR77:G.N/1
DC128:I.OP1/1 3.12 THR77:G.OG1/1
DC9:J.O3'/1 2.7 TYR42:A.OH/1
DC10:J.OP1/1 2.9 TYR42:A.OH/1
DC10:J.OP1/1 2.34 ARG50:A.NH1/1
DA11:J.OP1/1 2.82 ARG50:A.NE/1
DC13:J.OP2/1 3.32 LYS75:G.NZ/1
DT23:J.OP2/1 3.22 TYR43:H.OH/1
DA29:J.OP1/1 2.95 ARG30:H.NH2/1
DA29:J.N3/1 2.85 ARG34:H.NH1/1
DT32:J.OP1/1 2.98 ARG33:G.NH1/1
DG33:J.OP1/1 3.1 THR17:G.OG1/1
DG33:J.OP2/1 2.96 ARG18:G.NE/1
DG33:J.OP2/1 2.75 ARG18:G.NH2/1
DG33:J.N2/1 3.38 ARG12:G.NH2/1
DT34:J.OP1/1 2.87 LYS16:G.O/1
DT34:J.O4'/1 3.37 ARG12:G.NH1/1
DA41:J.O3'/1 3 THR89:H.OG1/1
DA42:J.OP1/1 2.77 SER88:H.N/1
DA42:J.OP1/1 2.55 THR89:H.N/1
DA43:J.OP2/1 2.92 ARG87:H.NH2/1
DT52:J.OP1/1 3.13 SER87:E.N/1
DC53:J.OP1/1 2.7 ARG73:E.NH1/1
DC53:J.OP1/1 2.91 ARG73:E.NH2/1
DC53:J.OP2/1 3.1 ARG73:E.NH2/1
DT62:J.OP1/1 3.34 ARG64:E.NH1/1
DG63:J.OP1/1 3 ARG64:E.NE/1
DG71:J.OP1/1 2.47 ARG43:E.NH2/1
DA72:J.O3'/1 2.52 THR119:E.OG1/1
DA73:J.OP1/1 2.54 VAL118:E.N/1
DA73:J.OP1/1 2.32 THR119:E.N/1
DA82:J.N3/1 3.1 ARG46:B.NH2/1
DC83:J.OP1/1 2.24 SER48:B.OG/1
DC83:J.OP1/1 2.66 GLY49:B.N/1
DA84:J.OP1/1 3.14 ARG36:B.NH1/1
DA84:J.OP1/1 2.49 ILE47:B.N/1
DA84:J.OP1/1 2.67 ILE47:B.O/1
DA84:J.OP2/1 2.94 ARG36:B.NH2/1
DT85:J.OP1/1 2.7 GLY45:A.N/1
DT85:J.OP1/1 2.91 ALA48:A.N/1
DT85:J.OP2/1 2.77 ARG40:B.NH2/1
DT85:J.O3'/1 2.45 ARG41:A.NH2/1
DG86:J.O4'/1 2.83 ARG41:A.NH1/1
DG93:J.OP1/1 2.89 ARG70:A.NH2/1
3DR97:J.OP2/1 2.67 ALA155:L.O/1
3DR98:J.OP1/1 2.5 LYS132:L.NZ/1
DG99:J.OP2/1 2.25 LYS244:L.NZ/1
DC100:J.OP1/1 2.42 GLN308:L.NE2/1
DT103:J.O3'/1 2.94 THR81:B.OG1/1
DT104:J.OP1/1 2.67 LYS80:B.N/1
DT104:J.OP1/1 2.54 THR81:B.OG1/1
DA114:J.OP2/1 2.64 ALA46:C.N/1
DC115:J.OP1/1 2.74 VAL44:C.N/1
DT122:J.OP1/1 2.72 LYS14:C.NZ/1
DG124:J.OP1/1 2.73 TYR41:D.OH/1
DA126:J.OP1/1 2.92 LYS35:D.N/1
DG134:J.OP1/1 3.05 ARG78:C.N/1
DG134:J.OP2/1 2.97 THR77:C.N/1
DG134:J.OP2/1 2.62 THR77:C.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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