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Nucleic atom dist Protein atom
DC-47:I.O2/1 2.74 ARG313:K.NH2/1
DT-45:I.OP1/1 2.77 SER311:K.OG/1
DG-44:I.N2/1 3.26 ARG222:O.NH1/1
DA-43:I.OP1/1 2.67 ARG326:K.NH2/1
DC-42:I.O2/1 2.63 GLU221:O.O/1
DC-40:I.OP1/1 3.05 ASP128:O.OD2/1
DC-37:I.N4/1 2.76 ARG329:K.NH2/1
DC-33:I.OP1/1 3.06 THR163:K.N/1
DC-32:I.OP1/1 2.41 SER193:K.N/1
DA-25:I.OP1/1 3.06 GLN85:A.NE2/1
DC-24:I.OP2/1 2.81 SER86:A.N/1
DA-23:I.OP1/1 2.85 PHE84:A.N/1
DA-13:I.OP1/1 2.2 ARG36:B.NH2/1
DG-12:I.OP1/1 3.3 LYS31:B.N/1
DT-3:I.OP1/1 2.59 VAL117:A.N/1
DG8:I.OP1/1 2.3 ARG45:F.NH1/1
DG8:I.OP2/1 3.24 ILE46:F.N/1
DT9:I.OP1/1 3.14 ALA47:E.N/1
DG17:I.OP2/1 2.41 ARG69:E.NH2/1
DG18:I.OP1/1 2.42 LYS64:E.N/1
DG18:I.OP2/1 3.24 LEU65:E.N/1
DG26:I.N3/1 3.14 ARG83:E.NH1/1
DG27:I.O4'/1 2.8 ARG83:E.NH1/1
DA28:I.OP1/1 2.81 LYS79:F.N/1
DA28:I.OP1/1 2.45 THR80:F.OG1/1
DA28:I.OP2/1 2.54 LYS79:F.N/1
DC38:I.OP1/1 2.82 ALA45:G.N/1
DC38:I.O4'/1 2.95 ARG42:G.NH2/1
DT39:I.OP1/1 3.08 VAL43:G.N/1
DT39:I.OP1/1 2.97 VAL43:G.O/1
DT39:I.OP2/1 2.95 ARG35:G.NH1/1
DT44:I.O2/1 2.97 ARG11:G.NH2/1
DT45:I.O4'/1 3.03 ARG11:G.NH2/1
DG49:I.OP1/1 2.39 ARG29:G.NH2/1
DA59:I.OP1/1 3.18 ARG77:G.N/1
DA59:I.OP1/1 3.33 ARG77:G.NE/1
DC71:I.OP1/1 2.76 THR45:A.OG1/1
DA-55:U.OP1/1 2.58 SER53:H.N/1
DA-54:U.OP1/1 3.45 ILE51:H.N/1
DA-54:U.OP2/1 2.3 TYR39:H.OH/1
DG-46:U.O3'/1 3 ARG30:H.NH1/1
DT-43:U.OP1/1 3.39 ARG17:G.N/1
DT-43:U.OP2/1 3.35 ARG17:G.NE/1
DT-43:U.OP2/1 3.27 ARG17:G.NH2/1
DG-42:U.OP1/1 2.77 LYS15:G.N/1
DG-34:U.OP1/1 2.88 SER84:H.N/1
DG-34:U.OP1/1 2.21 THR85:H.OG1/1
DA-23:U.OP1/1 2.1 PHE84:E.N/1
DA-23:U.OP1/1 2.55 PHE84:E.O/1
DA-23:U.O5'/1 2.84 ARG72:E.NH2/1
DG-3:U.OP1/1 1.65 THR118:E.OG1/1
DC8:U.OP1/1 2.76 ILE46:B.N/1
DC8:U.OP1/1 2.92 ILE46:B.O/1
DG17:U.OP2/1 2.43 ARG69:A.NH2/1
DA18:U.OP1/1 2.7 LYS64:A.N/1
DA18:U.OP2/1 3.16 LEU65:A.N/1
DC28:U.OP1/1 2.51 LYS79:B.N/1
DG36:U.OP1/1 3.31 GLN186:K.N/1
DG-56:T.OP1/1 2.23 SER53:D.N/1
DG-55:T.OP1/1 2.76 ILE51:D.N/1
DG-55:T.OP2/1 2.07 TYR39:D.OH/1
DG-55:T.OP2/1 3 ILE51:D.O/1
DA-49:T.N3/1 3.52 ARG30:D.NH2/1
DA-46:T.OP2/1 2.61 GLY28:C.O/1
DA-45:T.OP1/1 3.28 ARG17:C.N/1
DA-45:T.OP1/1 2.53 ARG17:C.NE/1
DC-44:T.OP1/1 3.23 ARG20:C.NH2/1
DC-44:T.O4'/1 2.95 ARG11:C.NH1/1
DA-42:T.O3'/1 2.61 GLN186:O.O/1
DA-42:T.N6/1 3.14 ARG329:O.NH1/1
DA-41:T.OP1/1 2.74 GLN186:O.N/1
DA-41:T.OP2/1 3.25 TYR212:O.N/1
DT27:J.OP2/1 3.07 ARG86:O.NH2/1
DT28:J.OP2/1 3.04 LYS262:K.NZ/1
DC30:J.O2/1 2.55 ARG313:O.NH2/1
DT32:J.OP1/1 2.89 SER311:O.OG/1
DG33:J.N2/1 2.91 ARG222:K.NH1/1
DA34:J.OP1/1 2.58 ARG326:O.NH2/1
DC35:J.O2/1 2.78 GLU221:K.O/1
DG40:J.O6/1 3.04 ARG329:O.NH2/1
DT41:J.OP1/1 2.89 ARG42:C.NH2/1
DG44:J.OP1/1 3.11 THR163:O.N/1
DT45:J.OP1/1 3.03 SER193:O.N/1
DT46:J.O2/1 3.03 ARG11:C.NH2/1
DT50:J.OP1/1 2.49 TYR37:D.OH/1
DT52:J.OP1/1 3.13 LYS31:D.N/1
DG60:J.OP1/1 2.29 THR76:C.N/1
DG61:J.OP2/1 2.42 LYS75:C.NZ/1
DA72:J.OP2/1 3.13 ARG42:E.N/1
DC73:J.OP2/1 2.92 ARG42:E.NH1/1
DT2:Q.O2/1 2.88 ASN348:O.ND2/1
DT3:Q.OP1/1 2.69 SER216:O.OG/1
DG4:Q.OP1/1 2.49 LEU113:O.N/1
DG4:Q.OP1/1 3.23 LEU113:O.O/1
DG4:Q.O4'/1 2.99 GLN215:O.O/1
DC6:Q.OP2/1 3.19 ARG117:O.NH2/1
DA7:Q.OP2/1 2.97 SER258:O.OG/1
DG9:Q.OP1/1 3.12 HIS374:K.NE2/1
DG9:Q.OP2/1 2.78 ARG69:K.N/1
DG9:Q.O3'/1 3.08 LYS107:K.NZ/1
DG10:Q.OP2/1 3.23 HIS374:K.N/1
DT2:M.O2/1 2.9 ASN348:K.ND2/1
DT3:M.OP1/1 2.66 SER216:K.OG/1
DG4:M.OP1/1 2.6 LEU113:K.N/1
DG4:M.OP2/1 3.38 ARG350:K.NE/1
DG4:M.O4'/1 2.91 GLN215:K.O/1
DC6:M.OP2/1 3.42 ARG117:K.NH2/1
DG9:M.OP1/1 3.23 HIS374:O.NE2/1
DG9:M.OP2/1 3.2 ARG69:O.N/1
DG9:M.O3'/1 2.65 LYS107:O.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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