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Nucleic atom dist Protein atom
DT13:T.OP1/1 3.11 ARG1021:A.NH1/1
DT13:T.OP2/1 2.22 GLU464:A.OE2/1
DG17:T.OP1/1 2.94 ARG1070:B.N/1
DA19:T.OP1/1 2.42 ARG1063:B.NH1/1
DA56:U.N3/1 2.49 LYS513:B.NZ/1
DG59:U.N2/1 3.01 ARG1600:A.NH2/1
DG62:U.OP1/1 3.28 GLN1601:A.OE1/1
DG65:U.OP1/1 3.18 LYS245:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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