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Nucleic atom dist Protein atom
DA-64:I.OP1/1 3.14 LYS56:E.NZ/1
DC-54:I.OP1/1 2.84 SER56:D.N/1
DC-54:I.OP2/1 2.59 SER56:D.OG/1
DA-53:I.OP1/1 2.67 TYR42:D.OH/1
DA-53:I.OP1/1 3.38 ILE54:D.N/1
DG-45:I.OP1/1 2.73 ARG33:D.NH1/1
DG-44:I.OP1/1 2.71 ARG32:C.NH1/1
DG-44:I.OP2/1 2.76 ARG35:C.NH2/1
DA-43:I.OP1/1 2.78 ARG17:C.N/1
DA-43:I.OP2/1 2.74 ARG17:C.NE/1
DG-42:I.OP1/1 2.86 LYS15:C.N/1
DG-42:I.OP1/1 3.23 LYS15:C.O/1
DG-42:I.OP1/1 2.82 ARG20:C.NH1/1
DG-42:I.OP1/1 2.75 ARG20:C.NH2/1
DA-41:I.OP1/1 2.82 ALA12:C.N/1
DA-34:I.OP1/1 2.81 THR88:D.N/1
DA-34:I.OP1/1 2.65 THR88:D.OG1/1
DA-34:I.OP2/1 2.83 SER87:D.N/1
DG-33:I.OP2/1 3.23 ARG86:D.NE/1
DG-33:I.OP2/1 2.74 ARG86:D.NH2/1
DT-24:I.OP1/1 2.8 GLN85:A.NE2/1
DT-23:I.OP1/1 2.73 ARG72:A.NH1/1
DT-23:I.OP1/1 2.88 PHE84:A.N/1
DT-23:I.OP2/1 2.75 ARG72:A.NH2/1
DA-14:I.O3'/1 2.89 ARG63:A.NE/1
DA-13:I.OP1/1 3.2 ARG63:A.NE/1
DA-13:I.OP1/1 2.8 THR30:B.OG1/1
DA-13:I.OP1/1 2.85 ARG36:B.NH2/1
DA-13:I.OP2/1 2.71 ARG36:B.NH1/1
DA-12:I.OP2/1 3.03 LYS31:B.N/1
DG-8:I.N2/1 2.97 ARG40:A.NH2/1
DG-5:I.OP1/1 2.9 ARG42:A.NE/1
DG-5:I.OP1/1 2.85 ARG42:A.NH2/1
DA-3:I.OP1/1 2.9 VAL117:A.N/1
DA-3:I.OP1/1 2.76 THR118:A.N/1
DA-3:I.OP1/1 2.68 THR118:A.OG1/1
DC-2:I.OP2/1 2.78 LYS122:A.NZ/1
DA-1:I.OP2/1 2.82 LYS115:E.NZ/1
DC7:I.OP1/1 2.63 SER47:F.OG/1
DC7:I.OP1/1 2.95 GLY48:F.N/1
DC7:I.O4'/1 2.95 ARG45:F.NH2/1
DG8:I.OP1/1 2.73 ILE46:F.N/1
DG8:I.OP2/1 2.74 ARG35:F.NH1/1
DG8:I.O5'/1 3.08 ARG39:F.NH2/1
DG8:I.O3'/1 3.07 GLY44:E.N/1
DT9:I.OP1/1 2.91 GLY44:E.N/1
DT9:I.OP1/1 2.77 VAL46:E.N/1
DT9:I.OP1/1 2.95 ALA47:E.N/1
DT9:I.O2/1 2.87 ARG40:E.NH1/1
DT9:I.O2/1 2.81 ARG40:E.NH2/1
DG10:I.OP1/1 2.9 TYR41:E.N/1
DG10:I.O4'/1 3.01 ARG40:E.NH2/1
DA17:I.OP1/1 2.75 ARG69:E.NH2/1
DA17:I.OP2/1 2.73 ARG69:E.NH1/1
DA17:I.O3'/1 3.08 ARG63:E.NE/1
DG18:I.OP1/1 2.87 ARG63:E.NE/1
DG18:I.OP1/1 2.73 ARG63:E.NH2/1
DG18:I.OP1/1 2.98 LYS64:E.N/1
DG18:I.OP2/1 3 LYS64:E.N/1
DG18:I.OP2/1 2.78 LEU65:E.N/1
DA26:I.OP1/1 2.78 LYS16:F.N/1
DA26:I.O5'/1 2.91 LYS16:F.NZ/1
DA26:I.O3'/1 2.91 ARG83:E.NH1/1
DG27:I.OP2/1 2.77 LYS79:F.NZ/1
DA28:I.OP1/1 2.9 LYS79:F.N/1
DA28:I.OP1/1 2.76 THR80:F.N/1
DA28:I.OP1/1 2.72 THR80:F.OG1/1
DG38:I.OP1/1 2.94 ALA45:G.N/1
DG38:I.O4'/1 2.84 ARG42:G.NH1/1
DG38:I.N3/1 2.99 ARG42:G.NH1/1
DA39:I.OP1/1 3.09 VAL43:G.N/1
DA39:I.OP2/1 2.79 HIS31:G.NE2/1
DA39:I.OP2/1 2.77 ARG35:G.NH1/1
DG48:I.OP1/1 2.62 TYR40:H.OH/1
DG48:I.OP2/1 2.77 LYS43:H.NZ/1
DG48:I.O3'/1 2.91 ARG29:G.NH2/1
DC49:I.OP1/1 2.77 ARG29:G.NH1/1
DC49:I.OP1/1 2.94 ARG29:G.NH2/1
DC49:I.OP1/1 2.89 SER36:H.N/1
DG50:I.OP1/1 3.22 LYS34:H.N/1
DC58:I.OP1/1 2.84 ARG77:G.N/1
DC58:I.OP2/1 2.85 THR76:G.N/1
DA70:I.OP1/1 2.66 THR45:A.OG1/1
DA70:I.O5'/1 3.35 ARG42:A.N/1
DA-54:J.OP1/1 2.83 SER56:H.N/1
DG-53:J.OP1/1 2.88 ILE54:H.N/1
DG-52:J.OP2/1 2.64 TYR42:H.OH/1
DA-44:J.OP1/1 2.81 ARG32:G.NE/1
DA-44:J.OP1/1 2.71 ARG32:G.NH2/1
DT-43:J.OP1/1 2.78 ARG17:G.N/1
DT-42:J.OP1/1 3.26 LYS15:G.N/1
DT-42:J.OP1/1 2.74 ARG20:G.NH1/1
DT-42:J.OP1/1 2.83 ARG20:G.NH2/1
DG-34:J.OP1/1 2.82 THR88:H.N/1
DG-34:J.OP1/1 2.64 THR88:H.OG1/1
DG-34:J.OP2/1 2.83 SER87:H.N/1
DA-33:J.OP2/1 2.79 LYS77:F.NZ/1
DA-33:J.OP2/1 2.74 ARG86:H.NH2/1
DC-23:J.OP1/1 2.73 ARG72:E.NH1/1
DC-23:J.OP1/1 2.89 PHE84:E.N/1
DC-23:J.OP2/1 2.75 ARG72:E.NH2/1
DA-22:J.OP1/1 2.87 ARG19:F.N/1
DA-22:J.OP2/1 2.76 ARG19:F.NH1/1
DA-14:J.O3'/1 2.89 ARG63:E.NH1/1
DA-13:J.OP1/1 2.75 THR30:F.OG1/1
DA-13:J.OP1/1 2.87 ARG36:F.NH2/1
DA-13:J.OP2/1 2.72 ARG36:F.NH1/1
DC-12:J.OP2/1 2.99 LYS31:F.N/1
DA-5:J.OP1/1 2.83 ARG42:E.NE/1
DA-5:J.OP2/1 2.77 ARG42:E.NH2/1
DG-3:J.OP1/1 2.9 VAL117:E.N/1
DG-3:J.OP1/1 2.72 THR118:E.N/1
DG-3:J.OP1/1 2.76 THR118:E.OG1/1
DC-2:J.OP2/1 2.83 LYS122:E.NZ/1
DG-1:J.OP2/1 2.79 LYS115:A.NZ/1
DC7:J.OP1/1 2.57 SER47:B.OG/1
DC7:J.OP1/1 2.92 GLY48:B.N/1
DC7:J.O4'/1 3.07 ARG45:B.NH2/1
DC8:J.OP1/1 2.78 ILE46:B.N/1
DC8:J.OP2/1 2.7 ARG35:B.NH1/1
DC8:J.OP2/1 2.78 ARG35:B.NH2/1
DC8:J.O3'/1 3.02 GLY44:A.N/1
DG9:J.OP1/1 2.89 GLY44:A.N/1
DG9:J.OP1/1 2.79 VAL46:A.N/1
DG9:J.OP1/1 2.93 ALA47:A.N/1
DC10:J.OP1/1 2.9 TYR41:A.N/1
DA17:J.OP1/1 2.79 ARG69:A.NH1/1
DA17:J.OP2/1 2.75 ARG69:A.NH2/1
DC18:J.OP1/1 2.79 ARG63:A.NH1/1
DC18:J.OP1/1 2.99 LYS64:A.N/1
DC18:J.OP2/1 2.8 LEU65:A.N/1
DG27:J.OP2/1 2.78 LYS79:B.NZ/1
DG28:J.OP1/1 2.98 LYS79:B.N/1
DG28:J.OP1/1 2.77 THR80:B.N/1
DG28:J.OP1/1 2.63 THR80:B.OG1/1
DT30:J.OP1/1 2.8 ARG33:H.NH1/1
DT31:J.OP2/1 3.28 ARG33:H.NH1/1
DT31:J.OP2/1 2.78 ARG33:H.NH2/1
DT38:J.O2/1 2.84 ARG42:C.NH2/1
DA39:J.OP1/1 2.76 VAL43:C.N/1
DA39:J.O4'/1 3.04 ARG42:C.NH1/1
DT43:J.O2/1 2.79 ARG11:C.NH1/1
DC44:J.O4'/1 3.01 ARG11:C.NH1/1
DC44:J.O4'/1 3.12 ARG11:C.NH2/1
DC44:J.O2/1 2.9 ARG11:C.NH2/1
DG48:J.OP1/1 2.63 TYR40:D.OH/1
DC49:J.OP1/1 2.69 ARG29:C.NH1/1
DC49:J.OP1/1 3.12 ARG29:C.NH2/1
DA50:J.OP1/1 2.83 LYS34:D.N/1
DA57:J.O4'/1 3.03 ARG77:C.NH2/1
DA57:J.O3'/1 2.9 ARG77:C.NH1/1
DG58:J.OP1/1 3 ARG77:C.N/1
DG58:J.OP2/1 2.89 THR76:C.N/1
DA59:J.OP1/1 2.81 LYS75:C.NZ/1
DC70:J.OP1/1 2.81 ARG42:E.N/1
DC70:J.OP1/1 2.67 THR45:E.OG1/1
DC70:J.O4'/1 3.18 HIS39:E.NE2/1
DA71:J.OP1/1 2.86 LYS37:E.NZ/1
DG81:J.OP1/1 3.05 ARG140:V.NH1/1
DG81:J.OP2/1 3.06 ASN115:V.ND2/1
DA-64:S.OP1/1 3.17 LYS56:O.NZ/1
DC-54:S.OP1/1 2.84 SER56:N.N/1
DC-54:S.OP2/1 2.59 SER56:N.OG/1
DA-53:S.OP1/1 2.67 TYR42:N.OH/1
DA-53:S.OP1/1 3.37 ILE54:N.N/1
DG-45:S.OP1/1 2.73 ARG33:N.NH1/1
DG-44:S.OP1/1 2.71 ARG32:M.NH1/1
DG-44:S.OP2/1 2.76 ARG35:M.NH2/1
DA-43:S.OP1/1 2.78 ARG17:M.N/1
DA-43:S.OP2/1 2.74 ARG17:M.NE/1
DG-42:S.OP1/1 2.86 LYS15:M.N/1
DG-42:S.OP1/1 3.23 LYS15:M.O/1
DG-42:S.OP1/1 2.82 ARG20:M.NH1/1
DG-42:S.OP1/1 2.75 ARG20:M.NH2/1
DA-41:S.OP1/1 2.82 ALA12:M.N/1
DA-34:S.OP1/1 2.81 THR88:N.N/1
DA-34:S.OP1/1 2.64 THR88:N.OG1/1
DA-34:S.OP2/1 2.83 SER87:N.N/1
DG-33:S.OP2/1 3.23 ARG86:N.NE/1
DG-33:S.OP2/1 2.74 ARG86:N.NH2/1
DT-24:S.OP1/1 2.8 GLN85:K.NE2/1
DT-23:S.OP1/1 2.73 ARG72:K.NH1/1
DT-23:S.OP1/1 2.88 PHE84:K.N/1
DT-23:S.OP2/1 2.75 ARG72:K.NH2/1
DA-14:S.O3'/1 2.89 ARG63:K.NE/1
DA-13:S.OP1/1 3.21 ARG63:K.NE/1
DA-13:S.OP1/1 2.79 THR30:L.OG1/1
DA-13:S.OP1/1 2.85 ARG36:L.NH2/1
DA-13:S.OP2/1 2.71 ARG36:L.NH1/1
DA-12:S.OP2/1 3.03 LYS31:L.N/1
DG-8:S.N2/1 2.96 ARG40:K.NH2/1
DG-5:S.OP1/1 2.89 ARG42:K.NE/1
DG-5:S.OP1/1 2.85 ARG42:K.NH2/1
DA-3:S.OP1/1 2.9 VAL117:K.N/1
DA-3:S.OP1/1 2.76 THR118:K.N/1
DA-3:S.OP1/1 2.68 THR118:K.OG1/1
DC-2:S.OP2/1 2.78 LYS122:K.NZ/1
DA-1:S.OP2/1 2.82 LYS115:O.NZ/1
DC7:S.OP1/1 2.63 SER47:P.OG/1
DC7:S.OP1/1 2.95 GLY48:P.N/1
DC7:S.O4'/1 2.95 ARG45:P.NH2/1
DG8:S.OP1/1 2.73 ILE46:P.N/1
DG8:S.OP2/1 2.74 ARG35:P.NH1/1
DG8:S.O5'/1 3.08 ARG39:P.NH2/1
DG8:S.O3'/1 3.06 GLY44:O.N/1
DT9:S.OP1/1 2.91 GLY44:O.N/1
DT9:S.OP1/1 2.77 VAL46:O.N/1
DT9:S.OP1/1 2.96 ALA47:O.N/1
DT9:S.O2/1 2.87 ARG40:O.NH1/1
DT9:S.O2/1 2.8 ARG40:O.NH2/1
DG10:S.OP1/1 2.9 TYR41:O.N/1
DG10:S.O4'/1 3 ARG40:O.NH2/1
DA17:S.OP1/1 2.75 ARG69:O.NH2/1
DA17:S.OP2/1 2.73 ARG69:O.NH1/1
DA17:S.O3'/1 3.08 ARG63:O.NE/1
DG18:S.OP1/1 2.87 ARG63:O.NE/1
DG18:S.OP1/1 2.74 ARG63:O.NH2/1
DG18:S.OP1/1 2.98 LYS64:O.N/1
DG18:S.OP2/1 3 LYS64:O.N/1
DG18:S.OP2/1 2.78 LEU65:O.N/1
DA26:S.OP1/1 2.78 LYS16:P.N/1
DA26:S.O5'/1 2.91 LYS16:P.NZ/1
DA26:S.O3'/1 2.91 ARG83:O.NH1/1
DG27:S.OP2/1 2.77 LYS79:P.NZ/1
DA28:S.OP1/1 2.9 LYS79:P.N/1
DA28:S.OP1/1 2.76 THR80:P.N/1
DA28:S.OP1/1 2.73 THR80:P.OG1/1
DG38:S.OP1/1 2.94 ALA45:Q.N/1
DG38:S.O4'/1 2.84 ARG42:Q.NH1/1
DG38:S.N3/1 2.99 ARG42:Q.NH1/1
DA39:S.OP1/1 3.09 VAL43:Q.N/1
DA39:S.OP2/1 2.8 HIS31:Q.NE2/1
DA39:S.OP2/1 2.77 ARG35:Q.NH1/1
DG48:S.OP1/1 2.61 TYR40:R.OH/1
DG48:S.OP2/1 2.77 LYS43:R.NZ/1
DG48:S.O3'/1 2.91 ARG29:Q.NH2/1
DC49:S.OP1/1 2.77 ARG29:Q.NH1/1
DC49:S.OP1/1 2.93 ARG29:Q.NH2/1
DC49:S.OP1/1 2.89 SER36:R.N/1
DG50:S.OP1/1 3.2 LYS34:R.N/1
DC58:S.OP1/1 2.84 ARG77:Q.N/1
DC58:S.OP2/1 2.85 THR76:Q.N/1
DA70:S.OP1/1 2.67 THR45:K.OG1/1
DA70:S.O5'/1 3.39 ARG42:K.N/1
DT81:S.OP1/1 2.45 ARG140:U.NH1/1
DA-81:T.OP2/1 2.11 LYS117:V.NZ/1
DA-54:T.OP1/1 2.83 SER56:R.N/1
DG-53:T.OP1/1 2.88 ILE54:R.N/1
DG-52:T.OP2/1 2.64 TYR42:R.OH/1
DA-44:T.OP1/1 2.8 ARG32:Q.NE/1
DA-44:T.OP1/1 2.71 ARG32:Q.NH2/1
DT-43:T.OP1/1 2.79 ARG17:Q.N/1
DT-42:T.OP1/1 3.26 LYS15:Q.N/1
DT-42:T.OP1/1 2.75 ARG20:Q.NH1/1
DT-42:T.OP1/1 2.83 ARG20:Q.NH2/1
DG-34:T.OP1/1 2.82 THR88:R.N/1
DG-34:T.OP1/1 2.64 THR88:R.OG1/1
DG-34:T.OP2/1 2.83 SER87:R.N/1
DA-33:T.OP2/1 2.79 LYS77:P.NZ/1
DA-33:T.OP2/1 2.74 ARG86:R.NH2/1
DC-23:T.OP1/1 2.73 ARG72:O.NH1/1
DC-23:T.OP1/1 2.89 PHE84:O.N/1
DC-23:T.OP2/1 2.76 ARG72:O.NH2/1
DA-22:T.OP1/1 2.87 ARG19:P.N/1
DA-22:T.OP2/1 2.76 ARG19:P.NH1/1
DA-14:T.O3'/1 2.89 ARG63:O.NH1/1
DA-13:T.OP1/1 2.75 THR30:P.OG1/1
DA-13:T.OP1/1 2.87 ARG36:P.NH2/1
DA-13:T.OP2/1 2.72 ARG36:P.NH1/1
DC-12:T.OP2/1 2.98 LYS31:P.N/1
DA-5:T.OP1/1 2.84 ARG42:O.NE/1
DA-5:T.OP2/1 2.76 ARG42:O.NH2/1
DG-3:T.OP1/1 2.9 VAL117:O.N/1
DG-3:T.OP1/1 2.72 THR118:O.N/1
DG-3:T.OP1/1 2.76 THR118:O.OG1/1
DC-2:T.OP2/1 2.83 LYS122:O.NZ/1
DG-1:T.OP2/1 2.79 LYS115:K.NZ/1
DC7:T.OP1/1 2.57 SER47:L.OG/1
DC7:T.OP1/1 2.93 GLY48:L.N/1
DC7:T.O4'/1 3.09 ARG45:L.NH2/1
DC8:T.OP1/1 2.78 ILE46:L.N/1
DC8:T.OP2/1 2.7 ARG35:L.NH1/1
DC8:T.OP2/1 2.78 ARG35:L.NH2/1
DC8:T.O3'/1 3.03 GLY44:K.N/1
DG9:T.OP1/1 2.89 GLY44:K.N/1
DG9:T.OP1/1 2.79 VAL46:K.N/1
DG9:T.OP1/1 2.93 ALA47:K.N/1
DC10:T.OP1/1 2.9 TYR41:K.N/1
DA17:T.OP1/1 2.79 ARG69:K.NH1/1
DA17:T.OP2/1 2.75 ARG69:K.NH2/1
DC18:T.OP1/1 2.79 ARG63:K.NH1/1
DC18:T.OP1/1 2.99 LYS64:K.N/1
DC18:T.OP2/1 2.8 LEU65:K.N/1
DG27:T.OP2/1 2.78 LYS79:L.NZ/1
DG28:T.OP1/1 2.98 LYS79:L.N/1
DG28:T.OP1/1 2.77 THR80:L.N/1
DG28:T.OP1/1 2.63 THR80:L.OG1/1
DT30:T.OP1/1 2.8 ARG33:R.NH1/1
DT31:T.OP2/1 3.28 ARG33:R.NH1/1
DT31:T.OP2/1 2.78 ARG33:R.NH2/1
DT38:T.O2/1 2.84 ARG42:M.NH2/1
DA39:T.OP1/1 2.76 VAL43:M.N/1
DA39:T.O4'/1 3.04 ARG42:M.NH1/1
DT43:T.O2/1 2.79 ARG11:M.NH1/1
DC44:T.O4'/1 3 ARG11:M.NH1/1
DC44:T.O4'/1 3.12 ARG11:M.NH2/1
DC44:T.O2/1 2.9 ARG11:M.NH2/1
DG48:T.OP1/1 2.63 TYR40:N.OH/1
DC49:T.OP1/1 2.69 ARG29:M.NH1/1
DC49:T.OP1/1 3.12 ARG29:M.NH2/1
DA50:T.OP1/1 2.83 LYS34:N.N/1
DA57:T.O4'/1 3.03 ARG77:M.NH2/1
DA57:T.O3'/1 2.9 ARG77:M.NH1/1
DG58:T.OP1/1 3 ARG77:M.N/1
DG58:T.OP2/1 2.89 THR76:M.N/1
DA59:T.OP1/1 2.8 LYS75:M.NZ/1
DC70:T.OP1/1 2.83 ARG42:O.N/1
DC70:T.OP1/1 2.63 THR45:O.OG1/1
DC70:T.O4'/1 3.07 HIS39:O.NE2/1
DG72:T.OP2/1 2.8 LYS37:O.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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