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Nucleic atom dist Protein atom
DA9:G.OP1/1 3.08 LYS434:B.NZ/1
DA9:G.OP2/1 2.66 ASN440:E.ND2/1
DT14:G.OP1/1 2.77 LYS477:9.NZ/1
DA8:H.OP2/1 3.44 ALA606:6.N/1
DC14:H.OP2/1 2.5 ASP480:3.OD1/1
DC29:H.OP1/1 2.02 SER473:D.OG/1
DC39:H.OP2/1 2.12 ASN398:B.N/1
DC39:H.O5'/1 2.41 ARG145:C.NH1/1
DC40:H.OP1/1 1.09 ARG145:C.NH2/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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