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Nucleic atom dist Protein atom
DA40:A.O5'/1 2.84 ARG77:G.NH1/1
DG41:A.OP1/1 2.79 TYR39:H.OH/1
DG41:A.OP2/1 2.94 TYR39:H.OH/1
DT47:A.O4'/1 3.07 ARG30:H.NH2/1
DT52:A.OP1/1 3.36 LYS15:G.N/1
DG60:A.OP1/1 3.49 SER84:H.N/1
DC71:A.OP1/1 2.77 ARG72:E.NH1/1
DC71:A.OP2/1 2.93 ARG72:E.NH2/1
DC73:A.OP2/1 3.17 LYS20:F.NZ/1
DA81:A.OP1/1 3.3 ARG36:F.NH2/1
DA81:A.OP2/1 3.44 ARG36:F.NH1/1
DC102:A.OP1/1 3.15 ILE46:B.N/1
DC102:A.OP2/1 3.14 ARG35:B.NH1/1
DC104:A.OP1/1 3.22 TYR41:M.N/1
DT106:A.OP2/1 2.7 LYS1206:I.NZ/1
DA111:A.OP2/1 3.13 ARG69:M.NH1/1
DC112:A.OP1/1 3.23 ARG63:M.NE/1
DC112:A.OP1/1 3.21 LYS64:M.N/1
DT124:A.O3'/1 3.16 ARG26:H.NH1/1
DA133:A.OP1/1 3.04 VAL43:C.N/1
DG142:A.OP1/1 2.89 TYR37:D.OH/1
DC143:A.OP1/1 3.11 ARG29:C.NH2/1
DG152:A.OP1/1 2.88 THR76:C.N/1
DG152:A.OP1/1 2.89 THR76:C.OG1/1
DC40:K.OP1/1 3.29 SER53:D.N/1
DA41:K.OP1/1 3.42 ILE51:D.N/1
DG49:K.OP1/1 3.38 ARG30:D.NH1/1
DG50:K.OP1/1 2.76 ARG32:C.NH2/1
DG50:K.OP2/1 3.26 ARG32:C.NE/1
DA51:K.OP1/1 3.19 ARG17:C.N/1
DA51:K.OP2/1 3.37 ARG17:C.NE/1
DG52:K.OP1/1 2.99 ARG20:C.NH2/1
DA60:K.OP1/1 2.76 SER84:D.N/1
DT70:K.OP2/1 3.06 SER86:M.OG/1
DT71:K.OP1/1 2.53 ARG72:M.NH1/1
DT71:K.OP1/1 3.34 PHE84:M.N/1
DT71:K.OP2/1 2.94 ARG72:M.NH2/1
DA81:K.OP1/1 2.36 ARG36:B.NH2/1
DA81:K.OP2/1 2.99 ARG36:B.NH1/1
DA91:K.OP1/1 3.07 VAL117:M.N/1
DA91:K.OP1/1 2.98 THR118:M.N/1
DG102:K.OP1/1 2.79 ILE46:F.N/1
DG102:K.OP1/1 3.08 ILE46:F.O/1
DG102:K.OP2/1 3.03 ARG35:F.NH1/1
DT103:K.OP1/1 3.37 GLY44:E.N/1
DA111:K.OP1/1 3.35 ARG69:E.NH2/1
DG112:K.OP1/1 3.22 LYS64:E.N/1
DG112:K.OP2/1 3.24 LEU65:E.N/1
DA122:K.OP1/1 3.18 LYS79:F.N/1
DA122:K.OP1/1 3.07 THR80:F.OG1/1
DA133:K.OP1/1 2.88 VAL43:G.N/1
DG142:K.OP1/1 3.28 TYR37:H.OH/1
DG142:K.N2/1 3.31 ARG30:H.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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