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Nucleic atom dist Protein atom
DA45:I.OP1/1 2.78 SER56:H.N/1
DG46:I.OP1/1 2.83 TYR42:H.OH/1
DG46:I.OP1/1 3.11 ILE54:H.N/1
DA55:I.OP1/1 2.95 ARG32:G.NE/1
DA55:I.OP1/1 3.01 ARG32:G.NH2/1
DA55:I.OP2/1 3.03 ARG32:G.NE/1
DT56:I.OP1/1 3.23 ARG17:G.N/1
DT57:I.OP1/1 2.86 LYS15:G.N/1
DT57:I.OP1/1 3.24 LYS15:G.O/1
DT57:I.OP1/1 2.72 ARG20:G.NH2/1
DG58:I.OP1/1 3.08 ALA12:G.N/1
DG65:I.OP1/1 2.48 SER87:H.N/1
DG65:I.OP1/1 3.08 THR88:H.N/1
DC76:I.OP1/1 2.69 ARG72:E.NH1/1
DC76:I.OP1/1 2.81 PHE84:E.N/1
DC76:I.OP2/1 2.65 ARG72:E.NH2/1
DA86:I.OP1/1 3.04 ARG36:F.NH1/1
DA86:I.OP1/1 2.72 ARG36:F.NH2/1
DA86:I.OP2/1 3.17 ARG36:F.NH1/1
DA94:I.OP1/1 2.95 ARG42:E.NE/1
DG96:I.OP1/1 2.61 VAL117:E.N/1
DG96:I.OP1/1 3.03 THR118:E.N/1
DG101:I.OP1/1 2.84 SER91:U.OG/1
DG101:I.OP2/1 2.79 LYS84:U.NZ/1
DC106:I.OP2/1 3.19 GLY48:B.N/1
DC107:I.OP1/1 2.72 ILE46:B.N/1
DC107:I.OP2/1 2.81 ARG35:B.NH1/1
DG108:I.OP1/1 2.96 GLY44:A.N/1
DG108:I.OP1/1 3.17 VAL46:A.N/1
DG108:I.OP1/1 3.34 ALA47:A.N/1
DG108:I.N2/1 3.16 ARG40:A.NH2/1
DG108:I.N3/1 3.33 ARG40:A.NH1/1
DG108:I.N3/1 2.99 ARG40:A.NH2/1
DC109:I.OP1/1 3.26 TYR41:A.N/1
DC109:I.O4'/1 3.09 ARG40:A.NH2/1
DA116:I.OP1/1 3.06 ARG69:A.NH2/1
DA116:I.OP2/1 2.46 ARG69:A.NH1/1
DA116:I.O3'/1 3.26 ARG63:A.NE/1
DA116:I.O3'/1 2.84 ARG63:A.NH2/1
DC117:I.OP1/1 3.44 ARG63:A.NE/1
DC117:I.OP1/1 2.88 LYS64:A.N/1
DC117:I.OP2/1 2.95 LEU65:A.N/1
DG127:I.OP1/1 3.07 LYS79:B.N/1
DG127:I.OP1/1 2.84 THR80:B.OG1/1
DG127:I.OP2/1 3.19 LYS79:B.N/1
DT129:I.OP1/1 2.69 SER32:H.OG/1
DT130:I.OP1/1 3.06 LYS30:H.NZ/1
DT137:I.OP1/1 3.34 ALA45:C.N/1
DA138:I.OP1/1 2.68 VAL43:C.N/1
DC143:I.O2/1 3.22 ARG11:C.NH2/1
DG147:I.OP1/1 2.91 TYR40:D.OH/1
DC148:I.OP1/1 2.7 ARG29:C.NH2/1
DA149:I.OP1/1 3.03 LYS34:D.N/1
DG157:I.OP1/1 2.64 THR76:C.N/1
DG157:I.OP1/1 3.11 ARG77:C.N/1
DA158:I.OP2/1 3.38 LYS75:C.NZ/1
DC169:I.OP1/1 3.16 ARG42:E.N/1
DC169:I.OP1/1 2.67 THR45:E.OG1/1
DT178:I.OP2/1 3.04 HIS24:U.NE2/1
DT178:I.O3'/1 3.15 ARG73:U.NH2/1
DA179:I.OP1/1 2.89 ARG73:U.NH2/1
DC45:J.OP1/1 2.74 SER56:D.N/1
DA46:J.OP1/1 3.01 ILE54:D.N/1
DA46:J.O5'/1 3.03 TYR42:D.OH/1
DG55:J.OP1/1 3.06 ARG32:C.NH2/1
DA56:J.OP1/1 3.19 ARG17:C.N/1
DA56:J.OP2/1 3.18 ARG17:C.NE/1
DG57:J.OP1/1 2.92 LYS15:C.N/1
DG57:J.OP1/1 2.63 ARG20:C.NH2/1
DG57:J.O4'/1 2.84 ARG11:C.NH1/1
DA58:J.OP1/1 3.41 ALA12:C.N/1
DA65:J.OP1/1 2.6 SER87:D.N/1
DT76:J.OP1/1 2.8 ARG72:A.NH1/1
DT76:J.OP1/1 2.92 PHE84:A.N/1
DT76:J.OP2/1 2.78 ARG72:A.NH2/1
DA86:J.OP1/1 2.45 ARG36:B.NH2/1
DA86:J.OP2/1 2.69 ARG36:B.NH1/1
DA96:J.OP1/1 2.68 VAL117:A.N/1
DA96:J.OP1/1 2.94 THR118:A.N/1
DA96:J.OP1/1 3.19 THR118:A.OG1/1
DC100:J.OP1/1 3.01 ARG46:U.NH2/1
DC100:J.OP1/1 3.01 LYS68:U.NZ/1
DG101:J.OP1/1 3.43 ALA88:U.N/1
DC106:J.OP2/1 3.14 GLY48:F.N/1
DG107:J.OP1/1 2.87 ILE46:F.N/1
DG107:J.OP2/1 2.85 ARG35:F.NH1/1
DG107:J.O3'/1 3.36 GLY44:E.N/1
DG107:J.N2/1 3.32 ARG40:E.NH2/1
DT108:J.OP1/1 2.85 GLY44:E.N/1
DT108:J.OP1/1 3.09 VAL46:E.N/1
DT108:J.OP1/1 3.09 ALA47:E.N/1
DT108:J.O2/1 3.01 ARG40:E.NH2/1
DG109:J.OP1/1 3.11 TYR41:E.N/1
DG109:J.O4'/1 3.34 ARG40:E.NH1/1
DA116:J.OP1/1 3.16 ARG69:E.NH2/1
DA116:J.OP2/1 2.75 ARG69:E.NH1/1
DG117:J.OP1/1 3.04 LYS64:E.N/1
DG117:J.OP2/1 2.99 LEU65:E.N/1
DA127:J.OP1/1 2.89 LYS79:F.N/1
DA127:J.OP1/1 2.87 THR80:F.OG1/1
DC129:J.OP1/1 3.23 ARG31:D.NH2/1
DC129:J.OP1/1 2.76 SER32:D.OG/1
DG137:J.OP2/1 3.11 ALA45:G.N/1
DA138:J.OP1/1 2.73 VAL43:G.N/1
DA142:J.N3/1 2.98 ARG11:G.NH1/1
DT143:J.O2/1 2.55 ARG11:G.NH2/1
DG145:J.OP1/1 2.68 LYS13:G.NZ/1
DG147:J.OP1/1 3.06 TYR40:H.OH/1
DC148:J.OP1/1 2.52 ARG29:G.NH2/1
DC148:J.OP1/1 3.45 SER36:H.N/1
DC148:J.OP1/1 3.19 SER36:H.O/1
DC148:J.O4'/1 2.82 ARG33:H.NH2/1
DG149:J.OP1/1 2.67 LYS34:H.N/1
DG149:J.O3'/1 2.79 ARG31:H.NH2/1
DG150:J.OP1/1 3.08 ARG31:H.NE/1
DC157:J.OP1/1 2.83 THR76:G.N/1
DC157:J.OP1/1 2.89 THR76:G.OG1/1
DC157:J.OP1/1 2.91 ARG77:G.N/1
DC169:J.OP1/1 3.21 ARG42:A.N/1
DC169:J.OP1/1 2.69 THR45:A.OG1/1
DA171:J.OP1/1 2.46 LYS37:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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