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Nucleic atom dist Protein atom
DT34:I.OP1/1 3.2 ARG49:A.NE/1
DT34:I.OP1/1 2.6 ARG53:A.NH2/1
DC35:I.OP1/1 2.41 LYS56:A.NZ/1
DA45:I.OP1/1 2.71 SER56:H.N/1
DA45:I.OP2/1 2.26 SER56:H.OG/1
DG46:I.O5'/1 2.57 TYR42:H.OH/1
DA55:I.OP1/1 3.05 ARG32:G.NH2/1
DT56:I.OP1/1 3.11 ARG17:G.N/1
DT56:I.O2/1 2.88 ARG11:G.NH1/1
DT57:I.OP1/1 3.06 LYS15:G.N/1
DT57:I.OP1/1 2.47 ARG20:G.NH2/1
DT57:I.O4'/1 3.03 ARG11:G.NH1/1
DG65:I.OP1/1 3.05 SER87:H.N/1
DG65:I.OP1/1 3.37 THR88:H.N/1
DC76:I.OP1/1 2.84 ARG72:E.NH1/1
DC76:I.OP1/1 2.96 ARG72:E.NH2/1
DC76:I.OP1/1 2.81 PHE84:E.N/1
DC76:I.OP2/1 2.7 ARG72:E.NH2/1
DA86:I.OP1/1 3.04 ARG36:F.NH1/1
DA86:I.OP1/1 2.69 ARG36:F.NH2/1
DA86:I.OP2/1 3.19 ARG36:F.NH1/1
DA94:I.OP1/1 2.6 ARG42:E.NH1/1
DG96:I.OP1/1 2.91 VAL117:E.N/1
DG96:I.OP1/1 3.13 THR118:E.OG1/1
DT102:I.OP1/1 2.55 SER57:U.OG/1
DC103:I.OP1/1 2.36 LYS63:U.NZ/1
DC107:I.OP1/1 2.83 ILE46:B.N/1
DC107:I.OP2/1 2.82 ARG35:B.NH2/1
DG108:I.OP1/1 2.86 GLY44:A.N/1
DG108:I.OP1/1 3.04 ALA47:A.N/1
DG108:I.N2/1 3.15 ARG40:A.NH2/1
DG108:I.N3/1 3.34 ARG40:A.NH1/1
DG108:I.N3/1 2.88 ARG40:A.NH2/1
DC109:I.OP1/1 3.16 TYR41:A.N/1
DC109:I.O4'/1 2.94 ARG40:A.NH2/1
DA116:I.OP2/1 2.69 ARG69:A.NH2/1
DC117:I.OP1/1 2.88 LYS64:A.N/1
DC117:I.OP2/1 3.35 LEU65:A.N/1
DG127:I.OP1/1 3.06 LYS79:B.N/1
DG127:I.OP1/1 2.96 THR80:B.N/1
DG127:I.OP1/1 2.82 THR80:B.OG1/1
DT129:I.OP1/1 3.19 ARG31:H.NH1/1
DT129:I.OP1/1 3 ARG31:H.NH2/1
DT129:I.OP1/1 2.46 SER32:H.OG/1
DT137:I.OP1/1 3.12 ALA45:C.N/1
DA138:I.OP1/1 2.57 VAL43:C.N/1
DA138:I.OP1/1 3.18 VAL43:C.O/1
DC143:I.O2/1 3.26 ARG11:C.NH2/1
DA145:I.OP1/1 2.77 LYS13:C.NZ/1
DG147:I.OP1/1 2.87 TYR40:D.OH/1
DG147:I.N2/1 3.35 ARG33:D.NH1/1
DC148:I.OP1/1 3.09 ARG29:C.NH2/1
DC148:I.OP1/1 3.35 SER36:D.N/1
DA149:I.OP1/1 2.74 LYS34:D.N/1
DG157:I.OP1/1 3.07 THR76:C.N/1
DC169:I.OP1/1 3.18 ARG42:E.N/1
DC169:I.OP1/1 2.52 THR45:E.OG1/1
DG171:I.OP1/1 2.61 LYS37:E.NZ/1
DA35:J.OP1/1 2.99 LYS56:E.NZ/1
DC45:J.OP1/1 3.04 SER56:D.N/1
DG55:J.OP1/1 2.58 ARG32:C.NH1/1
DA56:J.OP1/1 3.33 ARG17:C.N/1
DA56:J.OP2/1 3.04 ARG17:C.NE/1
DA56:J.OP2/1 3 ARG17:C.NH2/1
DG57:J.OP1/1 3.19 LYS15:C.N/1
DG57:J.OP1/1 2.86 ARG20:C.NH2/1
DG57:J.OP2/1 3.19 ARG20:C.NH1/1
DG57:J.OP2/1 3.05 ARG20:C.NH2/1
DA65:J.OP1/1 2.74 SER87:D.N/1
DA65:J.OP1/1 2.94 THR88:D.N/1
DG66:J.OP1/1 2.74 ARG86:D.NH1/1
DT76:J.OP1/1 2.66 ARG72:A.NH1/1
DT76:J.OP1/1 3.05 PHE84:A.N/1
DT76:J.OP2/1 2.74 ARG72:A.NH2/1
DA86:J.OP1/1 2.52 ARG36:B.NH2/1
DA86:J.OP2/1 2.92 ARG36:B.NH1/1
DA96:J.OP1/1 2.62 VAL117:A.N/1
DA96:J.OP1/1 3.15 THR118:A.OG1/1
DC106:J.OP1/1 2.98 GLY48:F.N/1
DG107:J.OP1/1 2.82 ILE46:F.N/1
DG107:J.OP2/1 3.2 ARG35:F.NH1/1
DT108:J.OP1/1 2.9 GLY44:E.N/1
DT108:J.OP1/1 2.92 VAL46:E.N/1
DT108:J.OP1/1 3.09 ALA47:E.N/1
DT108:J.O2/1 2.83 ARG40:E.NH1/1
DG109:J.OP1/1 3.32 TYR41:E.N/1
DG109:J.O4'/1 3.16 ARG40:E.NH2/1
DA116:J.OP1/1 3.2 ARG69:E.NH2/1
DA116:J.OP2/1 3.3 ARG69:E.NH1/1
DG117:J.OP1/1 3.16 ARG63:E.NE/1
DG117:J.OP1/1 3.13 ARG63:E.NH2/1
DG117:J.OP1/1 3.24 LYS64:E.N/1
DG117:J.OP2/1 3.35 LEU65:E.N/1
DA127:J.OP1/1 2.86 LYS79:F.N/1
DA127:J.OP1/1 2.92 THR80:F.OG1/1
DC129:J.OP1/1 3.1 ARG31:D.NH2/1
DG137:J.OP1/1 3.34 ALA45:G.N/1
DA138:J.OP1/1 2.72 VAL43:G.N/1
DT143:J.O2/1 3 ARG11:G.NH2/1
DG147:J.OP1/1 2.95 TYR40:H.OH/1
DC148:J.OP1/1 2.57 ARG29:G.NH2/1
DC148:J.OP1/1 3.4 SER36:H.N/1
DG149:J.OP1/1 2.92 LYS34:H.N/1
DC157:J.OP1/1 2.78 THR76:G.N/1
DC157:J.OP1/1 2.97 ARG77:G.N/1
DC169:J.OP1/1 3.34 ARG42:A.N/1
DC169:J.OP1/1 2.58 THR45:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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