Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG23:I.OP1/1 3.15 ARG61:U.NH2/1
DA45:I.OP1/1 2.74 SER56:H.N/1
DA45:I.OP1/1 2.82 SER56:H.OG/1
DG46:I.OP1/1 2.97 ILE54:H.N/1
DG46:I.O5'/1 2.74 TYR42:H.OH/1
DA55:I.OP1/1 3.04 ARG32:G.NE/1
DA55:I.OP1/1 3.19 ARG32:G.NH2/1
DA55:I.OP2/1 3.01 ARG32:G.NE/1
DT56:I.OP1/1 3.17 ARG17:G.N/1
DT56:I.OP2/1 3.06 ARG17:G.NH1/1
DT57:I.OP1/1 2.91 LYS15:G.N/1
DT57:I.OP1/1 3.24 LYS15:G.O/1
DT57:I.OP1/1 2.41 ARG20:G.NH2/1
DT57:I.OP2/1 2.6 ARG20:G.NH1/1
DT57:I.O2/1 3.17 ARG11:G.NH1/1
DG58:I.OP1/1 3.29 ALA12:G.N/1
DG65:I.OP1/1 2.67 SER87:H.N/1
DG65:I.OP1/1 3.15 THR88:H.N/1
DA66:I.OP2/1 2.99 ARG86:H.NH1/1
DT73:I.OP1/1 3.4 ARG31:D.NH1/1
DC76:I.OP1/1 2.61 ARG72:E.NH1/1
DC76:I.OP1/1 3.3 PHE84:E.N/1
DC76:I.OP2/1 2.81 ARG72:E.NH2/1
DA86:I.OP1/1 2.55 ARG36:F.NH2/1
DA86:I.OP2/1 2.65 ARG36:F.NH1/1
DG96:I.OP1/1 2.67 VAL117:E.N/1
DG96:I.OP1/1 2.97 THR118:E.N/1
DG101:I.OP1/1 2.96 SER112:U.OG/1
DC106:I.OP2/1 3.23 GLY48:B.N/1
DC107:I.OP1/1 2.7 ILE46:B.N/1
DG108:I.OP1/1 2.88 GLY44:A.N/1
DG108:I.OP1/1 3.09 VAL46:A.N/1
DG108:I.OP1/1 2.84 ALA47:A.N/1
DG108:I.N2/1 3.09 ARG40:A.NH2/1
DG108:I.N3/1 3.11 ARG40:A.NH1/1
DG108:I.N3/1 2.98 ARG40:A.NH2/1
DC109:I.OP1/1 3.22 TYR41:A.N/1
DC109:I.O4'/1 3.15 ARG40:A.NH2/1
DA116:I.OP1/1 3.17 ARG69:A.NH2/1
DA116:I.OP2/1 2.65 ARG69:A.NH1/1
DC117:I.OP1/1 2.97 LYS64:A.N/1
DC117:I.OP2/1 3.07 LEU65:A.N/1
DG127:I.OP1/1 3.07 LYS79:B.N/1
DG127:I.OP1/1 2.97 THR80:B.N/1
DG127:I.OP1/1 2.92 THR80:B.OG1/1
DT129:I.OP1/1 2.34 SER32:H.OG/1
DT137:I.OP1/1 2.98 ALA45:C.N/1
DA138:I.OP1/1 2.69 VAL43:C.N/1
DT142:I.O2/1 2.64 ARG11:C.NH1/1
DC143:I.O4'/1 2.53 ARG11:C.NH1/1
DC143:I.O2/1 3.04 ARG11:C.NH1/1
DC148:I.OP1/1 2.75 ARG29:C.NH2/1
DC148:I.OP1/1 3.41 SER36:D.N/1
DA149:I.OP1/1 3.03 LYS34:D.N/1
DG157:I.OP1/1 2.95 THR76:C.N/1
DC169:I.OP1/1 3.11 ARG42:E.N/1
DC169:I.OP1/1 2.5 THR45:E.OG1/1
DC169:I.OP2/1 3.02 ARG42:E.NH1/1
DT178:I.OP1/1 3.08 TYR47:U.N/1
DT23:J.O3'/1 2.36 TYR90:U.OH/1
DC45:J.OP1/1 3.13 SER56:D.N/1
DC45:J.OP2/1 2.37 SER56:D.OG/1
DA46:J.OP1/1 2.9 ILE54:D.N/1
DA46:J.O5'/1 2.44 TYR42:D.OH/1
DC52:J.O4'/1 2.94 ARG33:D.NH2/1
DC52:J.O2/1 2.92 ARG33:D.NH1/1
DG55:J.OP1/1 3.33 ARG32:C.NE/1
DG55:J.OP1/1 2.78 ARG32:C.NH2/1
DG55:J.OP2/1 3.15 ARG32:C.NE/1
DA56:J.OP1/1 3.43 ARG17:C.N/1
DA56:J.N3/1 3.29 ARG11:C.NH2/1
DG57:J.OP1/1 3.16 LYS15:C.N/1
DG57:J.OP1/1 2.8 ARG20:C.NH2/1
DA58:J.OP1/1 3.48 ALA12:C.N/1
DA65:J.OP1/1 2.46 SER87:D.N/1
DA65:J.OP1/1 3.04 THR88:D.N/1
DG66:J.OP2/1 3.23 ARG86:D.NH2/1
DT76:J.OP1/1 2.65 ARG72:A.NH1/1
DT76:J.OP1/1 2.97 PHE84:A.N/1
DT76:J.OP2/1 2.76 ARG72:A.NH2/1
DA86:J.OP1/1 2.49 ARG36:B.NH2/1
DA86:J.OP2/1 2.98 ARG36:B.NH1/1
DG91:J.N2/1 3.43 ARG40:A.NH1/1
DG94:J.OP1/1 2.8 ARG42:A.NE/1
DG94:J.OP1/1 2.79 ARG42:A.NH2/1
DA96:J.OP1/1 2.57 VAL117:A.N/1
DA96:J.OP1/1 2.99 THR118:A.N/1
DG99:J.O3'/1 3.09 ARG85:U.NH1/1
DG99:J.N2/1 2.87 ASN110:U.OD1/1
DC100:J.OP1/1 3.28 ARG85:U.NH1/1
DC100:J.O2/1 2.9 ASN110:U.ND2/1
DG101:J.OP1/1 3.11 ALA109:U.N/1
DC106:J.OP1/1 2.84 GLY48:F.N/1
DG107:J.OP1/1 2.74 ILE46:F.N/1
DG107:J.O3'/1 3.17 GLY44:E.N/1
DG107:J.N2/1 3.37 ARG40:E.NH2/1
DT108:J.OP1/1 2.95 GLY44:E.N/1
DT108:J.OP1/1 2.92 ALA47:E.N/1
DT108:J.O2/1 2.98 ARG40:E.NH2/1
DG109:J.OP1/1 3.41 TYR41:E.N/1
DG109:J.O4'/1 3.21 ARG40:E.NH1/1
DA116:J.OP1/1 2.81 ARG69:E.NH2/1
DA116:J.OP2/1 2.9 ARG69:E.NH1/1
DG117:J.OP1/1 3.01 LYS64:E.N/1
DG117:J.OP2/1 2.99 LEU65:E.N/1
DA127:J.OP1/1 2.81 LYS79:F.N/1
DA127:J.OP1/1 2.84 THR80:F.N/1
DA127:J.OP1/1 2.96 THR80:F.OG1/1
DC129:J.OP1/1 2.76 SER32:D.OG/1
DG137:J.OP2/1 3.3 ALA45:G.N/1
DA138:J.OP1/1 2.91 VAL43:G.N/1
DA138:J.O4'/1 3.33 ARG42:G.NH2/1
DT143:J.O2/1 3.21 ARG11:G.NH2/1
DG147:J.OP1/1 3.16 TYR40:H.OH/1
DC148:J.OP1/1 2.98 ARG29:G.NH1/1
DC148:J.OP1/1 2.83 ARG29:G.NH2/1
DC148:J.OP1/1 3.27 SER36:H.N/1
DC148:J.OP1/1 3.16 SER36:H.O/1
DG149:J.OP1/1 3.13 LYS34:H.N/1
DG149:J.OP1/1 2.78 LYS34:H.NZ/1
DC157:J.OP1/1 2.58 THR76:G.N/1
DC157:J.OP1/1 2.84 ARG77:G.N/1
DA158:J.OP2/1 2.9 LYS75:G.NZ/1
DC169:J.OP1/1 3.18 ARG42:A.N/1
DC169:J.OP1/1 2.32 THR45:A.OG1/1
DC170:J.OP2/1 2.8 ARG42:A.NH1/1
DA171:J.OP1/1 2.58 LYS37:A.NZ/1
DG180:J.OP1/1 2.73 ARG117:U.NH2/1
DG180:J.OP2/1 2.86 ARG117:U.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text