Interaction mode
Mode:  H-Bb H-Mj S-Bb L-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
zf-H2C2_2
(PF13465.8)
2i13 2wbu 4m9e 5k5h 5ke6 5ke7 5ke8 5keb 5und 5yef 6b0r 6blw 6ml2 6ml3 16
zf-C2H2
(PF00096.28)
2gli 1
PadR
(PF03551.16)
6qh0 1
RNA_pol_Rpb1_1
(PF04997.14)
5c4j 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Classic zinc finger, C2H2
(g.37.1.1)
2gli 1
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