Interaction mode
Mode:  H-Bb H-Mj S-Bb S-Mn L-Bb L-Mn 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the minor groove of DNA (Mn), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the minor groove of DNA (Mn).
Pfam domains
Export table
Pfam Domain Family PDB entries Number of structures
Histone
(PF00125.26)
1m19 1m1a 1u35 2f8n 4ym6 5b1l 5x7x 5y0c 5y0d 6jr0 6jr1 6kw4 12


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
Export table
SCOP Domain Family PDB entries Number of structures
Lambda integrase-like, catalytic core
(d.163.1.1)
1drg 1f44 2hof 3crx 4
Nucleosome core histones
(a.22.1.1)
1m1a 1u35 2f8n 3
© NPIDB team 2003 - 2021

text