Interaction mode
Mode:  H-Bb L-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
TAL_effector
(PF03377.15)
3ugm 4cja 4osi 4osj 13
zf-H2C2_2
(PF13465.8)
5t0u 2
TFIIB
(PF00382.21)
5fmf 1
XPG_N
(PF00752.19)
5co8 1
DNA_gyraseB_C
(PF00986.23)
2xkk 1
Endonuc-dimeris
(PF09124.12)
2qnc 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
DnaQ-like 3'-5' exonuclease
(c.55.3.5)
2pyl 1
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