Interaction mode
Mode:  H-Bb L-Mn 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), loop(s) (L) with the minor groove of DNA (Mn).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
RNA_pol_Rpb1_5
(PF04998.19)
4a3m 6cnb 2
DNA_pol_B_thumb
(PF14791.8)
3mgh 5iio 2
RecA
(PF00154.23)
3cmt 2
RNase_H
(PF00075.26)
3jyt 1
Helicase_C
(PF00271.33)
6o8e 1
TFIIB
(PF00382.21)
5n9g 1
Dimer_Tnp_hAT
(PF05699.16)
6dwz 1
H2TH
(PF06831.16)
2f5q 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
SRF-like
(d.88.1.1)
1n6j 1
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