Interaction mode
Mode:  H-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with the major groove of DNA (Mj).
Pfam domains
Export table
Pfam Domain Family PDB entries Number of structures
RNA_pol_Rpb2_3
(PF04565.18)
4xln 5ipm 5uh9 6bjs 6jcx 6jcy 6koq 6kqe 6kqm 6vw0 6wox 6woy 12
HHH_8
(PF14716.8)
2bcs 4kll 4ph5 4ub3 5iik 5j2h 5vrz 7
Sigma70_r3
(PF04539.18)
4xlq 4xlr 4xls 6m7j 6
zf-H2C2_2
(PF13465.8)
4m9e 5kea 6jnn 4
RNA_pol_Rpb1_1
(PF04997.14)
6dvc 7c97 7chw 3
RNA_pol_Rpb2_1
(PF04563.17)
5oa1 5w65 2
Put_DNA-bind_N
(PF06971.15)
3wgi 4
SRF-TF
(PF00319.20)
6wc5 1
TFIIE_alpha
(PF02002.19)
5fyw 1
Sigma70_r2
(PF04542.16)
6psr 1
Sigma70_r4
(PF04545.18)
6kj6 1
CENP-X
(PF09415.12)
4ne1 1
DBD_Tnp_Hermes
(PF10683.11)
6dx0 1
ORC4_C
(PF14629.8)
5v8f 1
Integrase_H2C2
(PF17921.3)
3l2q 1


© NPIDB team 2003 - 2021

text