Interaction mode
Mode:  L-Mn 
Description: Conserved protein-DNA contacts are provided by loop(s) (L) with the minor groove of DNA (Mn).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
RNA_pol_Rpb2_3
(PF04565.18)
2o5i 2o5j 3i4n 5d4c 6j9f 6kf9 7
RNA_pol_Rpb1_5
(PF04998.19)
2ja7 3how 3hox 4bbs 6uq0 6
RNA_pol_Rpb2_6
(PF00562.30)
5w65 6rwe 2
Toprim
(PF01751.24)
2xct 1
Ku
(PF02735.18)
6zhe 1
ResIII
(PF04851.17)
5iy9 1
RNA_pol_Rpb1_1
(PF04997.14)
5ms0 1
UvrD_C
(PF13361.8)
3u44 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Middle domain of MutM-like DNA repair proteins
(a.156.1.2)
1r2y 2f5q 2
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