Back to SCOP families list
SCOP family  PDB ID  protein domain Kind  Res, A 
  "Histone-like" proteins from archaea 1c8c A: dna 1.45
  (Uracil-5-)-methyltransferase 2bh2 A:75-432 rna 2.15
  3-methyladenine DNA glycosylase (AAG, ANPG, MPG) 1ewn A: dna 2.10
  30S ribosomal protein THX 2vqe U:2-25 rna 2.50
  39 kda initiator binding protein, IBP39, N-terminal domain 1pp7 U: dna 2.45
  5' to 3' exonuclease catalytic domain 1rxw A:3-219 dna 2.00
  5' to 3' exonuclease, C-terminal subdomain 1rxw A:220-324 dna 2.00
  A DNA-binding domain in eukaryotic transcription factors 1skn P: dna 2.50
  Achaeal helicase C-terminal domain 2p6r A:489-686 dna 3.00
  AlkB-like 2fdi A:15-214 dna 1.80
  Anticodon-binding domain 1c0a A:1-106 rna 2.40
  Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 1f7u A:484-607 rna 2.20
  Anticodon-binding domain of Class II aaRS 1h4s B:277-403 rna 2.85
  Anticodon-binding domain of PheRS 2iy5 B:682-781 rna 3.10
  AraC type transcriptional activator 1bl0 A:63-124 dna 2.30
  Arc/Mnt-like phage repressors 1bdt A: dna 2.50
  Archaeal tRNA CCA-adding enzyme 1tfw D:258-437 rna 2.20
  Archaeal tRNA CCA-adding enzyme catalytic domain 1tfw D:1-142 rna 2.20
  Archaeal tRNA CCA-adding enzyme substrate-binding domain 1tfw D:143-257 rna 2.20
  Archaeosine tRNA-guanine transglycosylase, C2 domain 1j2b A:361-505 rna 3.30
  Arginine repressor (ArgR), N-terminal DNA-binding domain 2p5l C:2-64 dna 2.85
  Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain 1f7u A:2-135 rna 2.20
  ATP-dependent DNA ligase catalytic domain 2q2t A:2-189 dna 2.30
  ATP-dependent DNA ligase DNA-binding domain 1x9n A:262-533 dna 3.00
  B3/B4 domain of PheRS, PheT 2iy5 B:191-399 rna 3.10
  Bacterial ribonucleases 1brn M: dna 1.76
  Bacteriophage CII protein 1zs4 B:4-81 dna 1.70
  Barrier-to-autointegration factor, BAF 2bzf A:2-89 dna 2.87
  beta-Glucosyltransferase (DNA-modifying) 1m5r A: dna 1.80
  BRCA2 tower domain 1mje A:2752-2887 dna 3.50
  Bromoviridae-like VP 1cwp A: rna 3.20
  C-terminal domain of glutamyl-tRNA synthetase (GluRS) 1n78 B:306-468 rna 2.10
  C-terminal domain of ribosomal protein L2 1vqo A:91-237 rna 2.20
  C-terminal domain of RNA polymerase alpha subunit 1lb2 E: dna 3.10
  C-terminal fragment of elongation factor SelB 1wsu C:575-632 rna 2.30
  C-terminal, Zn-finger domain of MutM-like DNA repair proteins 1k3x A:223-262 dna 1.25
  C5 cytosine-specific DNA methylase, DCM 2c7p A:1-327 dna 1.70
  cAMP-binding domain 1zrf A:8-137 dna 2.10
  Canonical RBD 2voo A:105-188 rna 1.80
  CAP C-terminal domain-like 3e6c C:148-227 dna 1.80
  Cell cycle transcription factor e2f-dp 1cf7 B: dna 2.60
  Centromere-binding 1hlv A:1-66 dna 2.50
  Chromosomal replication initiation factor DnaA C-terminal domain IV 1j1v A: dna 2.10
  Class I aminoacyl-tRNA synthetases (RS), catalytic domain 1j1u A: rna 1.95
  Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 1c0a A:421-585 rna 2.40
  Classic zinc finger, C2H2 1llm C:129-156 dna 1.50
  Cold shock DNA-binding domain-like 2hax A:1-66 dna 1.29
  Comoviridae-like VP 1pgl 2:1-182 rna 2.80
  CopG-like 1b01 B: dna 2.56
  Cryptochrome/photolyase FAD-binding domain 1tez C:205-475 dna 1.80
  Cryptochrome/photolyase, N-terminal domain 1tez C:2-204 dna 1.80
  CUT domain 2o4a A:370-452 dna 1.75
  Deoxycytidylate deaminase-like 2b3j A:1-151 rna 2.00
  DNA double-strand break repair nuclease 3dsc A:1-333 dna 2.70
  DNA helicase RuvA subunit, C-terminal domain 1c7y A:155-203 dna 3.10
  DNA helicase RuvA subunit, middle domain 1c7y A:65-150 dna 3.10
  DNA ligase/mRNA capping enzyme postcatalytic domain 2q2t A:190-293 dna 2.30
  DNA methylase TaqI, N-terminal domain 2ih2 D:21-243 dna 1.61
  DNA polymerase beta, N-terminal domain-like 2fmp A:10-91 dna 1.65
  DNA polymerase beta-like 2bcq A:386-575 dna 1.65
  DNA polymerase beta-like, second domain 2bcq A:329-385 dna 1.65
  DNA polymerase I 2hhv A:469-876 dna 1.55
  DNA polymerase III, beta subunit 3bep B:123-244 dna 1.92
  DNA repair glycosylase, 2 C-terminal domains 1m3q A:136-325 dna 1.90
  DNA repair protein MutS, domain I 1wb9 A:2-116 dna 2.10
  DNA repair protein MutS, domain III 1wb9 A:270-566 dna 2.10
  DNA-binding domain from NDT80 1mnn A: dna 1.40
  DNA-binding domain of intron-encoded endonucleases 1i3j A: dna 2.20
  DNA-binding domain of rap1 1ign A:360-445 dna 2.25
  DNA-binding domain of telomeric protein 1w0u B: dna 1.80
  DNA-binding N-terminal domain of transcription activators 1r8e A:3-120 dna 2.40
  DNA-binding protein LAG-1 (CSL) 3brd A:197-380 dna 2.21
  DNA-binding protein LAG-1 (CSL) 3brd A:381-541 dna 2.21
  DnaQ-like 3'-5' exonuclease 2py5 A:5-187 dna 1.60
  DNase I-like 2dnj A: dna 2.00
  Domains B1 and B5 of PheRS-beta, PheT 2iy5 B:152-190 rna 3.10
  Double-stranded RNA-binding domain (dsRBD) 2nug A:151-218 rna 1.70
  dsRNA phage RNA-dependent RNA-polymerase 1uvj B: rna 1.90
  EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1b23 P:313-405 rna 2.60
  Elongation factors 1b23 P:213-312 rna 2.60
  Endonuclease I 1oup B: dna 2.30
  Endonuclease III 1orn A: dna 1.70
  Endonuclease IV 1qum A: dna 1.55
  ets domain 1bc8 C: dna 1.93
  Eukaryotic DNA topoisomerase I, catalytic core 1k4t A:713-765 dna 2.10
  Eukaryotic DNA topoisomerase I, dispensable insert domain 1rrj A:636-712 dna 2.30
  Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 1a31 A:215-430 dna 2.10
  Eukaryotic proteases 1hao L: dna 2.80
  Eukaryotic RPB5 N-terminal domain 2nvq E:2-143 hybrid 2.90
  Eukaryotic type KH-domain (KH-domain type I) 2axy A:11-81 dna 1.70
  EV matrix protein 1h2c A: rna 1.60
  Excisionase-like 1rh6 B: dna 1.70
  Exodeoxyribonuclease V beta chain (RecC), C-terminal domain 1w36 F:818-1121 dna 3.10
  FHV B2 protein-like 2az2 A:2-71 rna 2.60
  Forkhead DNA-binding domain 2a07 G:506-584 dna 1.90
  Formyltransferase 2fmt B:1-206 rna 2.80
  FtsK C-terminal domain-like 2ve9 D:747-809 dna 1.90
  Fungal ribonucleases 1b2m A: rna 2.00
  G proteins 1b23 P:1-212 rna 2.60
  GAD domain 1c0a A:288-420 rna 2.40
  GalR/LacI-like bacterial regulator 1jft A:2-58 dna 2.50
  gamma,delta resolvase, catalytic domain 1gdt A:1-140 dna 3.00
  GatB/GatE C-terminal domain-like 2d6f C:445-503 rna 3.15
  GatB/GatE catalytic domain-like 2d6f C:396-444 rna 3.15
  GCM domain 1odh A: dna 2.85
  GerE-like (LuxR/UhpA family of transcriptional regulators) 1l3l D:172-234 dna 1.66
  Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain 1qtq A:339-547 rna 2.25
  GntR-like transcriptional regulators 1hw2 A:7-78 dna 3.25
  Group I mobile intron endonuclease 1t9i A: dna 1.60
  Guide RNA binding protein gBP 2gje D:28-173 rna 3.37
  Heat-shock transcription factor 3hts B: dna 1.75
  Hef domain-like 2bgw A:160-229 dna 2.80
  HLH, helix-loop-helix DNA-binding domain 1nkp E: dna 1.80
  HMG-box 1qrv A: dna 2.20
  HNH-motif 1v15 D: dna 2.40
  Homeodomain 1puf A: dna 1.90
  Hut operon positive regulatory protein HutP 1wpu B:5-148 rna 1.48
  Ilarvirus coat protein N-terminal fragment 1xok D: rna 3.00
  Intein (protein splicing domain) 1lwt A:416-454 dna 3.20
  Intein endonuclease 1lwt A:181-298 dna 3.20
  Interferon regulatory factor 2irf G: dna 2.20
  Intron-encoded homing endonucleases 1a73 B: dna 1.80
  Iron-dependent repressor protein 2isz A:2-64 dna 2.40
  KorB DNA-binding domain-like 1r71 B: dna 2.20
  Ku70 subunit middle domain 1jey A:254-534 dna 2.50
  Ku80 subunit middle domain 1jey B:242-545 dna 2.50
  Ku80 subunit N-terminal domain 1jey B:6-241 dna 2.50
  L-arabinose binding protein-like 2pua A:59-340 dna 2.90
  L15e 1vq8 M:1-194 hybrid 2.20
  L23p 1vq8 S:1-81 hybrid 2.20
  L30e/L7ae ribosomal proteins 1sds A: rna 1.80
  La domain 2voo B:9-103 rna 1.80
  lambda integrase N-terminal domain 1z1b A:11-59 dna 3.80
  Lambda integrase-like, catalytic core 1xo0 A:130-341 dna 2.00
  lambda integrase-like, N-terminal domain 1xo0 B:20-129 dna 2.00
  Large subunit 3cc2 G:12-73 rna 2.40
  Lesion bypass DNA polymerase (Y-family), catalytic domain 1jx4 A:1-240 dna 1.70
  Lesion bypass DNA polymerase (Y-family), little finger domain 1jx4 A:241-341 dna 1.70
  Leucine zipper domain 2e42 A:288-332 dna 1.80
  MarR-like transcriptional regulators 1z9c E:8-144 dna 2.64
  Met repressor, MetJ (MetR) 1mjo A: dna 2.10
  Methylated DNA-protein cysteine methyltransferase, C-terminal domain 1yfh C:92-177 dna 3.01
  Microviridae-like VP 2bpa 1: dna 3.00
  Middle domain of MutM-like DNA repair proteins 1k3x A:125-213 dna 1.25
  Mismatch glycosylase 1rrq A:9-229 dna 2.22
  mRNA cap methylase 1av6 A: rna 2.80
  Mug-like 1mwi A: dna 2.35
  MutY C-terminal domain-like 1rrq A:234-360 dna 2.22
  Myb/SANT domain 1h8a C:144-191 dna 2.23
  N-terminal domain of MutM-like DNA repair proteins 1k3x A:1-124 dna 1.25
  N6 adenine-specific DNA methylase, DAM 1yf3 B:1-259 dna 2.29
  NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 1a3q A:227-327 dna 2.10
  Nickel responsive regulator NikR, C-terminal domain 2hzv B:49-131 dna 3.10
  Nodaviridae-like VP 2bbv C: rna 2.80
  Nop domain 2ozb B:85-333 rna 2.60
  NSP3 homodimer 1knz M: rna 2.45
  Nuclear receptor 1dsz B: dna 1.70
  Nucleolar RNA-binding protein Nop10-like 2hvy C:3-55 rna 2.30
  Nucleosome core histones 1kx5 G: dna 1.94
  Nucleotide and nucleoside kinases 1rrc A:1-152 dna 2.46
  Omega transcriptional repressor 2bnw B:23-71 dna 2.45
  P4 origin-binding domain-like 1dp7 P: dna 1.50
  p53 DNA-binding domain-like 2ac0 D:96-289 dna 1.80
  Paired domain 1k78 E:19-81 dna 2.25
  Parvoviridae-like VP 4dpv Z: dna 2.90
  PAZ domain 1si3 A: rna 2.60
  Penicillinase repressor 1xsd A:5-126 dna 2.70
  Phage replication organizer domain 2c5r B:66-129 dna 2.90
  Phage repressors 2r1j L:3-68 dna 1.53
  Phenylalanyl-tRNA synthetase (PheRS) 2iy5 A:15-84 rna 3.10
  PhoB-like 1gxp E: dna 2.50
  PIWI domain 2bgg B:93-408 rna 2.20
  Pleiotropic translational regulator Hfq 1kq2 K: rna 2.71
  Poly A polymerase C-terminal region-like 1vfg B:137-351 rna 2.80
  Poly A polymerase head domain-like 1vfg B:1-136 rna 2.80
  Poly(A) polymerase, PAP, C-terminal domain 2q66 A:352-529 rna 1.80
  Poly(A) polymerase, PAP, middle domain 2q66 A:202-351 rna 1.80
  Poly(A) polymerase, PAP, N-terminal domain 2q66 A:5-201 rna 1.80
  Post formyltransferase domain 2fmt A:207-314 rna 2.80
  POU-specific domain 1e3o C:1-75 dna 1.90
  Prokaryotic DNA-bending protein 1p71 A: dna 1.90
  Prokaryotic ribosomal protein L17 2zjr K:3-115 rna 2.91
  Prokaryotic type I DNA topoisomerase 1mw8 X: dna 1.90
  Prokaryotic type KH domain (KH-domain type II) 2asb A:263-329 rna 1.50
  Pseudouridine synthase I TruA 2nqp D:8-270 rna 3.50
  Pseudouridine synthase II TruB 1k8w A:9-250 rna 1.85
  PUA domain 1k8w A:251-312 rna 1.85
  Pumilio repeat 1m8x B: rna 2.20
  RecG "wedge" domain 1gm5 A:106-285 dna 3.24
  Recombinase DNA-binding domain 1jko C: dna 2.24
  Recombination endonuclease VII, C-terminal and dimerization domains 2qnf B:104-157 dna 3.00
  Recombination endonuclease VII, N-terminal domain 2qnf B:1-103 dna 3.00
  Rel/Dorsal transcription factors, DNA-binding domain 1a3q A:37-226 dna 2.10
  Relaxase domain 1omh A: dna 1.95
  Reovirus components 1uon A: rna 7.60
  Replication initiation protein 1rep C:15-143 dna 2.60
  Replication initiation protein E1 1ksy A: dna 3.05
  Replication modulator SeqA, C-terminal DNA-binding domain 1j3e A: dna 2.50
  Replication protein Rep, nuclease domain 1uut A: dna 2.00
  Replication terminator protein (RTP) 1f4k B: dna 2.50
  Replication terminator protein (Tus) 2i06 A:5-309 dna 2.20
  Restriction endonuclease BamHI 3bam A: dna 1.80
  Restriction endonuclease BglI 1dmu A: dna 2.20
  Restriction endonuclease BglII 1dfm A: dna 1.50
  Restriction endonuclease BsobI 1dc1 A: dna 1.70
  Restriction endonuclease BstyI 2p0j B:1-203 dna 2.10
  Restriction endonuclease EcoO109IR 1wte A: dna 1.90
  Restriction endonuclease EcoRI 1cl8 A: dna 1.80
  Restriction endonuclease EcoRV 1sx5 B: dna 1.50
  Restriction endonuclease FokI, C-terminal (catalytic) domain 1fok A:387-579 dna 2.80
  Restriction endonuclease FokI, N-terminal (recognition) domain 1fok A:4-143 dna 2.80
  Restriction endonuclease HincII 1tx3 C:2-257 dna 2.50
  Restriction endonuclease MspI 1sa3 B: dna 1.95
  Restriction endonuclease MunI 1d02 A: dna 1.70
  Restriction endonuclease NaeI 1iaw A: dna 2.40
  Restriction endonuclease NgoIV 1fiu A: dna 1.60
  Restriction endonuclease PvuII 3pvi A: dna 1.59
  Reverse transcriptase 2fjx A:24-278 dna 1.80
  Rhabdovirus nucleocapsid protein 2gic A:2-422 rna 2.92
  Ribonuclease A-like 1oj8 A: dna 1.70
  Ribonuclease H 2g8i A:62-193 hybrid 1.65
  Ribonuclease PH domain 1-like 2jea A:1-191 rna 2.33
  Ribonuclease PH domain 2-like 2jea B:156-241 rna 2.33
  Ribosomal L11/L12e N-terminal domain 1mms A:8-70 rna 2.57
  Ribosomal L27 protein 2zjr T:2-85 rna 2.91
  Ribosomal protein L1 2hw8 A:1-228 rna 2.10
  Ribosomal protein L10 1vq8 G:12-73 hybrid 2.20
  Ribosomal protein L10e 1vqo H:1-163 rna 2.20
  Ribosomal protein L11, C-terminal domain 1vqo I:71-140 rna 2.20
  Ribosomal protein L13 1vqo J:4-145 rna 2.20
  Ribosomal protein L14 1vq8 K:1-132 hybrid 2.20
  Ribosomal protein L16p 2zjr J:6-141 rna 2.91
  Ribosomal protein L18 and S11 1vqo N:1-186 rna 2.20
  Ribosomal protein L19 2zjr M:2-109 rna 2.91
  Ribosomal protein L19 (L19e) 1vqo P:1-143 rna 2.20
  Ribosomal protein L20 2zjr N:2-118 rna 2.91
  Ribosomal protein L21p 2zjr O:5-98 rna 2.91
  Ribosomal protein L22 1vqo R:1-150 rna 2.20
  Ribosomal protein L24e 1vq8 U:4-56 hybrid 2.20
  Ribosomal protein L25-like 1dfu P: rna 1.80
  Ribosomal protein L28 2zjr U:8-79 rna 2.91
  Ribosomal protein L29 (L29p) 1vqo V:1-65 rna 2.20
  Ribosomal protein L3 1vq8 B:1-337 hybrid 2.20
  Ribosomal protein L30p/L7e 1vqo W:1-154 rna 2.20
  Ribosomal protein L31e 1vq8 X:7-88 hybrid 2.20
  Ribosomal protein L31p 2j28 Z:1-70 rna 8.00
  Ribosomal protein L32e 1vq8 Y:95-236 hybrid 2.20
  Ribosomal protein L32p 2zjr Z:2-59 rna 2.91
  Ribosomal protein L33p 2j28 1:1-54 rna 8.00
  Ribosomal protein L34p 2j28 2:1-46 rna 8.00
  Ribosomal protein L35p 2j28 3:1-64 rna 8.00
  Ribosomal protein L36 2zjr 4:1-37 rna 2.91
  Ribosomal protein L37ae 1vqo Z:10-82 rna 2.20
  Ribosomal protein L37e 1vqo 1:1-56 rna 2.20
  Ribosomal protein L39e 1vq8 2:1-49 hybrid 2.20
  Ribosomal protein L4 1vqo C:1-246 rna 2.20
  Ribosomal protein L44e 1vq8 3:1-92 hybrid 2.20
  Ribosomal protein L5 1vq8 D:10-174 hybrid 2.20
  Ribosomal protein L6 1vqo E:1-79 rna 2.20
  Ribosomal protein L9 N-domain 2j28 H:1-58 rna 8.00
  Ribosomal protein S10 2vqe J:3-100 rna 2.50
  Ribosomal protein S13 2vqe M:2-126 rna 2.50
  Ribosomal protein S14 2vqe N:2-61 rna 2.50
  Ribosomal protein S15 1g1x G: rna 2.60
  Ribosomal protein S16 2uub P:1-83 rna 2.80
  Ribosomal protein S18 2vqe R:16-88 rna 2.50
  Ribosomal protein S19 2uub S:2-81 rna 2.80
  Ribosomal protein S2 2vqe B:7-241 rna 2.50
  Ribosomal protein S20 2vqe T:8-106 rna 2.50
  Ribosomal protein S3 C-terminal domain 2uub C:107-207 rna 2.80
  Ribosomal protein S4 2vqe D:2-209 rna 2.50
  Ribosomal protein S6 2vqe F:1-101 rna 2.50
  Ribosomal protein S7 2vqe G:2-156 rna 2.50
  Ribosomal protein S8 2vqe H:1-138 rna 2.50
  Ribosomal proteins L15p and L18e 1vq8 L:1-150 hybrid 2.20
  Ribosomal proteins L24p and L21e 1vq8 T:1-119 hybrid 2.20
  Ribosomal S5 protein, N-terminal domain 2uub E:5-73 rna 2.80
  Ribosome complexes 3cc2 C:1-246 rna 2.40
  Ribotoxin 1jbs B: rna 1.97
  RNA bacteriophage capsid protein 2bu1 B:1-129 rna 2.20
  RNA polymerase 2vum A:2-1455 hybrid 3.40
  RNA-dependent RNA-polymerase 1n35 A: rna 2.50
  RNA-polymerase beta 2o5i C:1-1119 hybrid 2.50
  RNA-polymerase beta-prime 2o5i D:2-1505 hybrid 2.50
  RNase III catalytic domain-like 2nug A:3-150 rna 1.70
  RNase Z-like 2fk6 A:1-307 rna 2.90
  RNB domain-like 2vnu D:495-910 rna 2.30
  RUNT domain 1h9d A: dna 2.60
  Satellite viruses 1a34 A: rna 1.81
  Seryl-tRNA synthetase (SerRS) 1ser B:501-610 rna 2.90
  Sigma4 domain 1rio H: dna 2.30
  Signal peptide-binding domain 1hq1 A: rna 1.52
  Signal recognition particle (SRP) complex 1ry1 C: rna 12.00
  Signal recognition particle alu RNA binding heterodimer, SRP9/14 1e8o A: rna 3.20
  Single strand DNA-binding domain, SSB 1xjv A:6-145 dna 1.73
  Single-strand selective monofunctional uracil-DNA glycosylase SMUG1 1oe4 A: dna 2.00
  Sm motif of small nuclear ribonucleoproteins, SNRNP 1m8v H: rna 2.60
  SMAD MH1 domain 1ozj B: dna 2.40
  Small protein B (SmpB) 2czj G:4-123 rna 3.01
  Small subunit 2vqe E:5-154 rna 2.50
  Spo0A 1lq1 D: dna 2.30
  SRA domain-like 2zkd B:405-612 dna 1.60
  SRF-like 1egw A: dna 1.50
  SRP alpha N-terminal domain-like 2go5 1:1-129 rna 7.40
  SRP19 1jid A: rna 1.80
  STAT DNA-binding domain 1bg1 A:322-575 dna 2.25
  T-box 1h6f A: dna 1.70
  T4 endonuclease V 2fcc A:2-138 dna 2.30
  T7 RNA polymerase 1msw D: hybrid 2.10
  Tandem AAA-ATPase domain 2j0s A:22-243 rna 2.21
  TaqI C-terminal domain-like 2ih2 D:244-413 dna 1.61
  TATA-box binding protein (TBP), C-terminal domain 1qna B:116-197 dna 1.80
  TBP-associated factors, TAFs 1jfi A: dna 2.62
  Tetracyclin repressor-like, N-terminal domain 1qpi A:4-67 dna 2.50
  The origin DNA-binding domain of SV40 T-antigen 2itl B:135-249 dna 1.65
  Thioltransferase 1t8e B: dna 2.54
  Threonyl-tRNA synthetase (ThrRS), second 'additional' domain 1qf6 A:63-241 rna 2.90
  TMV-like viral coat proteins 1rmv A: rna 2.90
  Tombusvirus P19 core protein, VP19 1r9f A: rna 1.85
  Trafficking protein A-like 2bsq H:2-65 dna 3.00
  TRAM domain 2bh2 B:16-74 rna 2.15
  Transcription factor IIA (TFIIA), beta-barrel domain 1nh2 C: dna 1.90
  Transcription factor IIB (TFIIB), core domain 1ais B:1108-1205 dna 2.10
  Transcriptional coactivator PC4 C-terminal domain 2c62 A:62-127 dna 1.74
  Translational machinery components 2vqe I:2-128 rna 2.50
  Transposase inhibitor (Tn5 transposase) 1mus A: dna 1.90
  Transposase IS200-like 2vjv B:6-130 dna 1.90
  tRNA-guanine transglycosylase 1q2r C: rna 2.90
  tRNA-intron endonuclease catalytic domain-like 2gjw A:64-142 rna 2.85
  TROVE domain-like 1yvp A:5-363 rna 2.20
  Trp repressor, TrpR 1tro G: dna 1.90
  Trp RNA-binding attenuation protein (TRAP) 1gtf V: rna 1.75
  Tymoviridae-like VP 1ddl C: rna 2.70
  Type II DNA topoisomerase 2rgr A:419-1177 dna 3.00
  Tyrosyl-DNA phosphodiesterase TDP1 1rff B:162-350 dna 1.70
  Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain 1h3e A:352-432 rna 2.90
  U2A'-like 1a9n C: rna 2.38
  Uracil-DNA glycosylase 1lau E: dna 1.80
  V set domains (antibody variable domain-like) 2ok0 L:1-107 dna 1.89
  ValRS/IleRS/LeuRS editing domain 1qu2 A:201-394 rna 2.20
  Valyl-tRNA synthetase (ValRS) C-terminal domain 1ivs B:797-862 rna 2.90
  Very short patch repair (VSR) endonuclease 1cw0 A: dna 2.30
  Viral DNA-binding domain 2bop A: dna 1.70
  XPF/Rad1/Mus81 nuclease 2bgw A:16-148 dna 2.80
  Z-DNA binding domain 1j75 A: dna 1.85
  Zinc finger design 2i13 A:31-184 dna 1.96
  Zn2/Cys6 DNA-binding domain 3coq B:8-48 dna 2.40
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