SCOP:
 All list
  Class:
 All beta proteins
    Fold:
 Common fold of diphtheria toxin/transcription factors/cytochrome f
      Superfamily:
 p53-like transcription factors
        Family:
 T-box
protein domain  species  PDB ID  instances  bonded 
T domain from Brachyury transcription factor African clawed frog (Xenopus laevis) [TaxId: 8355] 1xbr 2 2
T-box protein 3, tbx3 Human (Homo sapiens) [TaxId: 9606] 1h6f 2 2
Total: 2 4 4
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj 
Method of 3-D alignment: SSM
Quality of 3-D alignment: middle
Analized family: T-box [ b.2.5.4 ]
Analized complexes: 2
Complexes with DNA: 2
Conserved water: 55
Download:
Sequence alignment: b_2_5_4.fas ]
Sequence alignment with secondary structure: b_2_5_4_with_ss.fas ]
Superposition in PDB format: b.2.5.4.pdb ]
Alignment in MSF: b_2_5_4.msf ]
Image of alignment with secondary structure marked: b_2_5_4.PNG ]
Water clusters: b.2.5.4.flat.txt ]
b.2.5.4.pivot.txt ]
RasMol script: b.2.5.4.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1xbr A - - 1
ON
1xbr B - - 2
ON
1h6f A - - 3
ON
1h6f B - - 4
ON
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