SCOP:
 All list
  Class:
 All beta proteins
    Fold:
 Common fold of diphtheria toxin/transcription factors/cytochrome f
      Superfamily:
 p53-like transcription factors
        Family:
 RUNT domain
protein domain  species  PDB ID  instances  bonded 
Acute myeloid leukemia 1 protein (AML1), RUNT domain Human (Homo sapiens) [TaxId: 9606] 1h9d 2 2
Acute myeloid leukemia 1 protein (AML1), RUNT domain Mouse (Mus musculus) [TaxId: 10090] 1hjb 2 2
Acute myeloid leukemia 1 protein (AML1), RUNT domain Mouse (Mus musculus) [TaxId: 10090] 1hjc 2 2
Acute myeloid leukemia 1 protein (AML1), RUNT domain Mouse (Mus musculus) [TaxId: 10090] 1io4 1 1
Total: 4 7 7
    Extended information about type of interaction with DNA:
General
Interaction class:  S-Bb S-Mj L-Bb L-Mj L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: low
Analized family: RUNT domain [ b.2.5.6 ]
Analized complexes: 11
Complexes with DNA: 4
Conserved water: 54
Download:
Sequence alignment: b_2_5_6.fas ]
Sequence alignment with secondary structure: b_2_5_6_with_ss.fas ]
Superposition in PDB format: b.2.5.6.pdb ]
Alignment in MSF: b_2_5_6.msf ]
Image of alignment with secondary structure marked: b_2_5_6.PNG ]
Water clusters: b.2.5.6.flat.txt ]
b.2.5.6.pivot.txt ]
RasMol script: b.2.5.6.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1ljm A - - 1
ON
1ljm B - - 2
ON
1h9d A - - 3
ON
1h9d C - - 4
ON
1e50 A - - 5
ON
1e50 C - - 6
ON
1e50 E - - 7
ON
1e50 G - - 8
ON
1e50 Q - - 9
ON
1e50 R - - 10
ON
1cmo A - - 11
ON
1co1 A - - 12
ON
1eaq A - - 13
ON
1eaq B - - 14
ON
1eao A - - 15
ON
1eao B - - 16
ON
1ean A - - 17
ON
1hjc A - - 18
ON
1hjc D - - 19
ON
1hjb C - - 20
ON
1hjb F - - 21
ON
1io4 C - - 22
ON
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